Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0310 |
Symbol | |
ID | 3682782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 398643 |
End bp | 399404 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715638 |
Product | hypothetical protein |
Protein accession | YP_320831 |
Protein GI | 75906535 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTAT TTAGTAGACC CCTACCCCCC GTTTTTAACA GCATTGAAGA AGAACGCCTA CACCGTAAAC AGCGTCTAGC AGCAGCTTTT CGCCTGTTTG GCAAGTTTGG CTTCAGCGAA GGAATTGCAG GTCACATCAC AGCTCGTGAC CCGGAATTTA CAGACCACTT TTGGGTAAAT CCCTTAGGGA AGTATTTTGG ACACATTCGA GTTTCGGACT TGGTATTGGT GAATCGAGAT GGTGATGTGG TCAAAGGCGA CGCACTCATA AATCAAGCTG CTTTCGCTAT CCATTCCCAA ATTCATGAAG CTCGTCCCGA TGTCGTTGCG GCGGCTCATG CTCACTCAAT TTATGGTAAA GCTTGGTCTA GTTTAGGTCG TCTACTTGAC CCTTTAACCC AAGATGCTTG CGCTTTTTAC GAAGACCACG CCTTGCTGGA TGACTATACA GGGGTCGTTT TAGAAACTTC TGAAGGTAAA CGACTGGCTG AAACCTTAGG TAATAACAAA GCGCTAATTT TGCGGAATCA TGGCATTCTC ACTGTGGGAC ACACAGTAGA TGAAGCAGCA TTTTGGTACA TTAGCCTAGA GCGTTCTTGC CAAGCTCAAC TACTAGCGGA AGCTGCGGGT CAACCTAAAA TAATTGGCCA TGAAACCGCC CGTTTAACCC ATAGTCAAGT AGGGGAACCG AAAGCAGGTT GGTTTAGTTT CCAGCCTCTT TACGATAGAA TCGTCCGCGA AGAACCTGAG TTGTTTGATT AG
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Protein sequence | MSVFSRPLPP VFNSIEEERL HRKQRLAAAF RLFGKFGFSE GIAGHITARD PEFTDHFWVN PLGKYFGHIR VSDLVLVNRD GDVVKGDALI NQAAFAIHSQ IHEARPDVVA AAHAHSIYGK AWSSLGRLLD PLTQDACAFY EDHALLDDYT GVVLETSEGK RLAETLGNNK ALILRNHGIL TVGHTVDEAA FWYISLERSC QAQLLAEAAG QPKIIGHETA RLTHSQVGEP KAGWFSFQPL YDRIVREEPE LFD
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