Gene Ava_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0310 
Symbol 
ID3682782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp398643 
End bp399404 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content46% 
IMG OID637715638 
Producthypothetical protein 
Protein accessionYP_320831 
Protein GI75906535 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTAT TTAGTAGACC CCTACCCCCC GTTTTTAACA GCATTGAAGA AGAACGCCTA 
CACCGTAAAC AGCGTCTAGC AGCAGCTTTT CGCCTGTTTG GCAAGTTTGG CTTCAGCGAA
GGAATTGCAG GTCACATCAC AGCTCGTGAC CCGGAATTTA CAGACCACTT TTGGGTAAAT
CCCTTAGGGA AGTATTTTGG ACACATTCGA GTTTCGGACT TGGTATTGGT GAATCGAGAT
GGTGATGTGG TCAAAGGCGA CGCACTCATA AATCAAGCTG CTTTCGCTAT CCATTCCCAA
ATTCATGAAG CTCGTCCCGA TGTCGTTGCG GCGGCTCATG CTCACTCAAT TTATGGTAAA
GCTTGGTCTA GTTTAGGTCG TCTACTTGAC CCTTTAACCC AAGATGCTTG CGCTTTTTAC
GAAGACCACG CCTTGCTGGA TGACTATACA GGGGTCGTTT TAGAAACTTC TGAAGGTAAA
CGACTGGCTG AAACCTTAGG TAATAACAAA GCGCTAATTT TGCGGAATCA TGGCATTCTC
ACTGTGGGAC ACACAGTAGA TGAAGCAGCA TTTTGGTACA TTAGCCTAGA GCGTTCTTGC
CAAGCTCAAC TACTAGCGGA AGCTGCGGGT CAACCTAAAA TAATTGGCCA TGAAACCGCC
CGTTTAACCC ATAGTCAAGT AGGGGAACCG AAAGCAGGTT GGTTTAGTTT CCAGCCTCTT
TACGATAGAA TCGTCCGCGA AGAACCTGAG TTGTTTGATT AG
 
Protein sequence
MSVFSRPLPP VFNSIEEERL HRKQRLAAAF RLFGKFGFSE GIAGHITARD PEFTDHFWVN 
PLGKYFGHIR VSDLVLVNRD GDVVKGDALI NQAAFAIHSQ IHEARPDVVA AAHAHSIYGK
AWSSLGRLLD PLTQDACAFY EDHALLDDYT GVVLETSEGK RLAETLGNNK ALILRNHGIL
TVGHTVDEAA FWYISLERSC QAQLLAEAAG QPKIIGHETA RLTHSQVGEP KAGWFSFQPL
YDRIVREEPE LFD