Gene Ava_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0307 
Symbol 
ID3682896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp393945 
End bp395279 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content46% 
IMG OID637715635 
ProductFHA domain-containing protein 
Protein accessionYP_320828 
Protein GI75906532 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCA AAAACGCAAG ACATAATGCT TTTCTGCGGC TAGTGTCTGG TAACGGAGCA 
GCATTTGGGT CAGAATCTCG CTACTCGCTT ACCAGTAAAG AAGTGGTAAT TGGACGTGAC
CCCAGCTGCC AAGTTGTTTT AGATGCCATG ATGTATCGGA TGGTATCCCG TCGTCATGCT
GTGGTTCGTC CCGTTGCTTC ATCTGTAGAT AGCAAATTTA GCTGGGTACT TTGTGATTTG
AATAGTGCCA ACGGTACTTA TTTAAATGGT CAACGCTTGT ACGGATGTCA GGAGTTACAC
GCAGGCGATC GCATTTCTTT GGGTGCTGAT GGGCCACAAT TCCTGTTTGA GTATGCAGTC
GCTCCCCAAC CGACAATCAT CACCAACCAA GTTGCACCCC TACCCTCAGC CAAGCACCCC
CCTAAACCAG ATTCGGTGAG CTTCACCCAG CTGTTTCCGA TTATTTCTAC TGGTAAGGAT
TTAACACGCA AAGCTTATCT TGTCCCCGGA ATACTGACAG TAGTATTTGT GGTGTTGATG
TTTGCAACGG TGGGTAGGCC ACAAGCCAAT CAAGTGATCG TCGCAACTTA TATAGCTTTG
GCTGCTTACT ATTTTATTTA CCAACTTTGC GGCAAGCCTA AACCTTGGTG GGTGTTAGTT
GGTGCGGCTT TGAGTACAAC CCTGATTTTG CTTAGTCCCT TATTAAATTT ATTTATTTTC
ATTTTTCGGG AAGTCCTTCC TGGTAGCGTA CCACCCATAG ATCAGCCTGT CAGCAGCCTC
ACAGAATTAT TTGTGGGGTA CTTTTTTGGG GCTGGCTTAA TGGAAGAATT ACTCAAAGCT
TTGCCCATAT TGGGAGTATA TCTAATTGCT TTGGGACTAC CACCCGCTTG GCGAGAACGT
GTCGGTGTTT GGGAACCTTT GGATGGTATT CTCTTGGGAA CTGCTTCGGC TGTAGGCTTT
ACCTTATTGG AAACTCTGGG ACAATATGTA CCGGCTGCGT CCTTACAAGC AGGTACAGAA
GTGGGTTTAC AAGTCTTGAT TGCTCGCATC TTAGGCTTGC CAGCAGGCCA CATGGCTTAT
AGTGGTTATT TGGGATATTT CATCGGTTTA GCTGCTCTTA AACCCCGTCA TGCTAAACAG
ATTCTCGCAG TTGGTTACCT CAGTGCCGCC GCACTTCACG CTTTATGGAA TACAGCCGGA
CACAGTAATA ATTTGCTCTT AGTTGTTGTT GGGGTTTTGT CTTATGCTTT CTTGATGGCA
GCGATTCTGA AAGCCAGAGC TTTATCACCA ACGCGATCGC AAAATTTTGC CACTCGTTTT
CTTGATCCTA AATAG
 
Protein sequence
MTGKNARHNA FLRLVSGNGA AFGSESRYSL TSKEVVIGRD PSCQVVLDAM MYRMVSRRHA 
VVRPVASSVD SKFSWVLCDL NSANGTYLNG QRLYGCQELH AGDRISLGAD GPQFLFEYAV
APQPTIITNQ VAPLPSAKHP PKPDSVSFTQ LFPIISTGKD LTRKAYLVPG ILTVVFVVLM
FATVGRPQAN QVIVATYIAL AAYYFIYQLC GKPKPWWVLV GAALSTTLIL LSPLLNLFIF
IFREVLPGSV PPIDQPVSSL TELFVGYFFG AGLMEELLKA LPILGVYLIA LGLPPAWRER
VGVWEPLDGI LLGTASAVGF TLLETLGQYV PAASLQAGTE VGLQVLIARI LGLPAGHMAY
SGYLGYFIGL AALKPRHAKQ ILAVGYLSAA ALHALWNTAG HSNNLLLVVV GVLSYAFLMA
AILKARALSP TRSQNFATRF LDPK