Gene Ava_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0300 
Symbol 
ID3682889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp384252 
End bp385220 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content46% 
IMG OID637715628 
Productglycosyl transferase family protein 
Protein accessionYP_320821 
Protein GI75906525 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATC AGCAAAATGA TCCAACCACC GCCAACAGCT TTTTGCCAAT GGTATCGGTG 
GTTGTTCCTA TTTATAACGG TGAGGCAGAT TTACCAGAGT TAATCAGCTG TTTTGTATCT
CAAACCTATC CCCCAGAAAG GGTAGAATAC TTATTGGTAG ATAATAACAG CAGCGATCGC
ACCCTCTCCT TCATAGAAAA ATCTGCGGCT AATTCCCCAA TTAATATTCG TCCCCTCAGC
GAAAATAAAA TTCAAAGCTC CTACGCGGCG CGTAACATAG GAATCCGGTC TGCTGTCAGT
GAAATTGTGG TGTTCACAGA TGCTGATTGC CGTCCCCAAC CCCAATGGCT GAATTCACTA
ATTCAACCTT TTGTCAATCC AGAAGTGGTA ATTGTTGCAG GTGAAATCAC TGCTTTACCA
GGAAAAAACT TATTAGAAAA ACACGCAGAC CGCCAAGATA CGCTCTCACA AAAGCACACC
CTCGCTAATA GCTTTTGTCC CTACGGTCAA ACGGCTAACC TAGCAATCAG ACGCACTGCC
TTTACTCAAG CAGGGTTATT CCGTCCCTAT CTGACTACTG GCGGTGATGC AGATATTTGC
TGGCGAATTT TGCGGTCAAA TATTGGTAGT TTAGAATTTG CCCCAGATGC CATTGTCCAG
CACCGTCACC GTGCCACACT TAAGGAGCTA GCCAGTCAAT GGCGACGCTA CGGACGCTCC
AATCGCTATC TGCACGAACT ACATGGTGTA AACTTAATGC CTGATATCAG CCTCAAAGAT
ATCGGCTACC GTTTAACACG TTGGTTAATT AAAGAATTAC CACGGGACAT CGCCAAAGCG
ATCGCAGGTA AAGCCGACTT GGTAGATGTA TTCAATACTC CCATTAGTCT GTTCACAGCT
AGAGCGCGTG CAGTCGGACA ACGGGATGCC CAACTACCAG AACAGGCTAA GACCATTGAA
TGGTTGTAG
 
Protein sequence
MNHQQNDPTT ANSFLPMVSV VVPIYNGEAD LPELISCFVS QTYPPERVEY LLVDNNSSDR 
TLSFIEKSAA NSPINIRPLS ENKIQSSYAA RNIGIRSAVS EIVVFTDADC RPQPQWLNSL
IQPFVNPEVV IVAGEITALP GKNLLEKHAD RQDTLSQKHT LANSFCPYGQ TANLAIRRTA
FTQAGLFRPY LTTGGDADIC WRILRSNIGS LEFAPDAIVQ HRHRATLKEL ASQWRRYGRS
NRYLHELHGV NLMPDISLKD IGYRLTRWLI KELPRDIAKA IAGKADLVDV FNTPISLFTA
RARAVGQRDA QLPEQAKTIE WL