Gene Ava_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0270 
Symbol 
ID3682898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp347535 
End bp348536 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content34% 
IMG OID637715598 
Productglycosyl transferase family protein 
Protein accessionYP_320791 
Protein GI75906495 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT ATTTTTTCAA TCCACCGACA ATTTCAGTAA TTATTCCAGC TTATAATTGT 
GAAGCCACCA TCAAAGAAAC AATCGAATCA GTTCTAAGGC AATCTTTCAG TGATTTTGAA
TTAATAGTCA TCAATGATGG CTCACAAGAT AACACTTTAG ATGTTGTTTA CCAAGTACAA
GATTCACGAA TTAAGATATT TTCTTTTGAG AATGCTGGCG GAAATATTAG TCGAAATCGC
GGTCTGAATA TTTCCCAGGG TAAGTTCATC AGTTTCTTAG ATGCAGATGA TATTTGGATG
CCTGATAAGC TCCAATCTCA GTTGGAAGCT TTATACAAAA ACCCTGGGTT TCATGTTGCT
TATAGCTGGA CTGATTATAT TGATAAAGAT GGTAATTTTT TAGCTTCAGG TAAACGCGTT
ACTCTGAGTG GCGATGTCTA TCAGAAGTTA TTGATTAACA ATTTTTTAGA GAATGGTTCT
AATCCTTTAA TTCTCAGAGA GGCTTTAGTT GAACTGGAGG GATTTGATCA ATCATTAAAA
GCTGCTCAAG ATTGGGATAT GTGGCTGCGA TTAGCAGAAA AATATTCTTT TGTATCTGTA
CCTCTTGTAC AAATACTGTA TCGAGTCAGT AGTAATTCTT TATCAGCCAA TCTTGTTAGA
CAAGAAAGAT ATTCCTTGCA AGTACTTGAG AAAGCTTATC AAGCCAGACC TACAATTGGT
AAGCATCTTT TGCATTTAAG TATAGCCAAT ATTTATAAAT ATCTGACTTG TAAAGCCTTA
CAAAAGCCAT ATTCTCGACA TAATGGTTTG ACGGCTATTA AATTTCTGTG GAAATATATT
CTGTATGATT CAGCTAGACA AAAAAGAATT AGCGCTACAC TCAAACTTTT TTTAAAGTCT
GTGATCATCA TGATGTTACC TCCTGGCGTA TCTACGTTAT TACTAACACA AGTAAAGAAA
AAATCCCCAA AACCGGAACT ATCAATCATT TCAGGCAGTT AA
 
Protein sequence
MTEYFFNPPT ISVIIPAYNC EATIKETIES VLRQSFSDFE LIVINDGSQD NTLDVVYQVQ 
DSRIKIFSFE NAGGNISRNR GLNISQGKFI SFLDADDIWM PDKLQSQLEA LYKNPGFHVA
YSWTDYIDKD GNFLASGKRV TLSGDVYQKL LINNFLENGS NPLILREALV ELEGFDQSLK
AAQDWDMWLR LAEKYSFVSV PLVQILYRVS SNSLSANLVR QERYSLQVLE KAYQARPTIG
KHLLHLSIAN IYKYLTCKAL QKPYSRHNGL TAIKFLWKYI LYDSARQKRI SATLKLFLKS
VIIMMLPPGV STLLLTQVKK KSPKPELSII SGS