Gene Ava_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0257 
Symbol 
ID3682944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp328980 
End bp329981 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content33% 
IMG OID637715585 
Productcyanophycin synthetase-like 
Protein accessionYP_320778 
Protein GI75906482 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000601246 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTAG TCACGTCAAT AATTCAGAAG ATAGCACCTC AAATAGGTGC GGTTGTTGTG 
GTAGATCCAG AATATGAATT AGTGGGGCAT ATTACATTTA AAAATGGAAA AAAATCATTT
TTTAGTACCA CGAAATTAAA TATTAACGGT TTTGGTTCCG CAGAAATAGC CAAAGATAAG
GGTTATTCAA AATTTTTCCT CAAACATTTT GGCTATCATG TGACTGAAGG GCAAACATTT
TTTAATCAGA AATTATGTAA AAAAATAGGT AACGAACGAG ATATTGATGC TGGATTTGAA
TATGCTAAAC TTATTGGATT TCCAGTAATT ATTAAACCCA TTAATTTAAG CCAAGGAAAA
TTAGTTACAA AAATTCATAA CAAAACGGAG TATTATCAAG TAGCCAAAAA AATATTGCGA
GCTAATGCAG GATTGATTAT TGAGAGATTT TATCTAGGTA AAGATTACAG AATTGTGGTG
ATAGATGACG AAATAATAGC GGCATATCAA AGGCTACCAC TATCAGTAAT TGGAGATGGA
AAATCAAATG TTACAGAATT AATACAACGT AAGCAAGATG GTTTCATCCA AAATTTGGGA
AAAAAAATTA TTGATGTTGA TGACTTTCGG ATTAAACGCA AGTTGCAGAA GCAAAGTCTC
AATTTAAACA GTGTGATTCC CAATGGTAAG GTTGTATATC TTTTAGATAA TGCTAATTTA
TCTAGTGGCG GTGAAGCAGT GGATGTTACG GAAAATATTC ATCCCGACTT TCAGAAATTG
GCTTTAAACG TCACAAAAGA TATGGGATTG CGATTAATGG GTTTGGATAT AATTACTCAA
GATATTACCA GACCTATGGT GGATTATGTG ATTATTGAAG TTAATGGTTC TCCTGGCTTA
ACACATTATG CTTCCATTGG AGATATTCAA ACTAAGAGAG TGGAAGATTT ATATCTCAAA
GTTTTGAAAG CATTGGAAAC GGAGTACAAC AGCGAAAATT AA
 
Protein sequence
MPLVTSIIQK IAPQIGAVVV VDPEYELVGH ITFKNGKKSF FSTTKLNING FGSAEIAKDK 
GYSKFFLKHF GYHVTEGQTF FNQKLCKKIG NERDIDAGFE YAKLIGFPVI IKPINLSQGK
LVTKIHNKTE YYQVAKKILR ANAGLIIERF YLGKDYRIVV IDDEIIAAYQ RLPLSVIGDG
KSNVTELIQR KQDGFIQNLG KKIIDVDDFR IKRKLQKQSL NLNSVIPNGK VVYLLDNANL
SSGGEAVDVT ENIHPDFQKL ALNVTKDMGL RLMGLDIITQ DITRPMVDYV IIEVNGSPGL
THYASIGDIQ TKRVEDLYLK VLKALETEYN SEN