Gene Ava_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0220 
Symbol 
ID3683023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp279866 
End bp281974 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content45% 
IMG OID637715548 
ProductSerine/threonine protein kinase 
Protein accessionYP_320741 
Protein GI75906445 
COG category[R] General function prediction only
[K] Transcription
[L] Replication, recombination and repair
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.03094e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAT TATATTGTTC AAAAGGACAC GAGAATTACC CAGGGACTCG GTTCTGTCTT 
AAGTGTGGGG AGAAGTTGGT GGATAATTTT TTTACACAGG GAATTCAACC TGGGTTAACT
TTAAGTGATC GCTATCTGAT TGTACGTCAA GTTGGTCAGG GGGGATTTGG GCGCACTTAT
TTAGCTGAAG ATATTAACCG TTTTCGTGAA CTTTGTATTT TAAAAGAATT TTCACCCCAA
GTTCAAACAG CCTACGTCTT ACAAAAAGCT GAGGAGTTGT TTCAACGGGA AGCCAAGGTT
CTCCATCAGC TACAACATCC CCAAATACCC CGCTTTCGAG AAATATTTCG TGTCAATCTA
GCCGGTAAAG AATATCTATT TTTAGTTCAA GATTATGTAG AAGGGGAAAC TTATAGTGGG
TTATTAAATC AACGCATACA GCAAGGGTTA CGGTTTACAG AAGCAGAAAT CCGTCAACTG
TTGCAGCAAA TTCTCCCAGT TTTGGACTAT ATCCATTCTC TGGGTGTGAT TCATCGTGAT
ATATCCCCAG ATAATCTCAT TCTTCGCAGT GTTGACAAGC TACCAGTATT GATTGATTTT
GGTGGTGTCA AACAAGTAGT AGCCGTTGTT GCATCTCAAT ATTATCAACC AGGTGTAGTT
GCATCTCCTC CAGCCGCTAC CCTACTAGGT AAAGTGGGAT TTGCACCACC AGAACAGATG
CAAACTGGAA ATGTCTCTCC CCACAGTGAT TTATATGCTT TGGCGGTCAC GGCAGTAGTT
TTACTGACTG GAAAACAACC ACAGGAATTA CTTGATACAT ATAACTTATC TTGGAATTGG
CGACGAGAAA TTAGCCTTAG TCCAATTTTT GGGCAAGTAT TAGATAAAAT GCTGGCGGCT
AGACCAGGCG ATCGCTATCA GTCTGCCCAG CAAATATTAC ACGCGCTTAA CCCAGCACCA
GTCAATTATC CCCCCACTCA ACCCCCCATA CCAACACCCC TTCCCACACC ACCACCTGTT
TCTACACCCG ATACAATTGC CGTAGCCCCA TCCCTTCCCA CTCCTGACAT TTCCCCCGCA
CCCCAAAGGA AAAACTGGTT GATACCAACC GCCGCATTCT TATTAGTCGG TACTGTTGGC
TTAGTTTGGT TAGGAATGAG TAACAGCGAT CGCAACTCTA TCTCAGTTGA CCCCACTCCC
ACCCCCACAG AGACACAACC CACCAACCCC CTAGATAAAT ACTCCCCCGC AGAACGGCAA
CGCAAACAAA CATTGAACGA TCGCCGTCAA CAGTTGGGTA TAGATTTTAA CTTTTACATT
AATGTAGTCA ATCAAATTTT CTGGGACAGA AACCCTAGTG AACGGGGACG CACCCTCAGC
GATGGGGCAG AAGATGAAAA CTTACGGACC GAATGGGATG CAGTCGCCGC CGAATTGTTA
GATAAACTCA AACCCCTGAG TAATCGGGCT AGACGACAAC TAGGTACTTA TACTGCCGCA
GAACGCGATC GCTGGAAAGT AGAAGTCAAT CAAATCAACG TTGGTAGCCG TTCTTTATAT
GATTTAGGTG ATGCAGCCTT CTTCAGAGCA TTTCCTGAAC AGAAGGGTAA AAACTTTATC
GAACAACCAA TTGGACAAGT TTGGCAAGCC TTTGTCAGTG ATAAACTGAG TGCGATCGTT
GCTGGTACTG TCTTTCAAAA GATTGTCTTT GATCCAGGCG CTACAAGTAA AACAGTCAGT
GGCACTCTCC AGCCTGCTGG CGGTAGAGTT TTTATTGCTG ACTTAGCTCA AAACCAATCT
CTAGAATTGC AGCTACAAGC CAACTCCAAA GTTTTATTAT CGGTATATTC CCCCTCAGGA
AAAACCATAT TTTTAGAAGA TTCTGAAAAA CGCAGCTTAT CAACTGAACT CCCAGAATCG
GGATTTTATG AGTTCGTTGT CGTGTCTACT GCATCCACAT CCGCAGATTA TCAACTCACC
CTCACAGTAG AAAATCCCAC CCCGCCACCA GAACCGACAC CAACCCCCAG CGAAACGACC
ACGCCTACAC CAACTCCCAG TGAAACGCCC ACAGAAACGC CCACACCTAC ACCAACTACA
GCACCGTAA
 
Protein sequence
MTKLYCSKGH ENYPGTRFCL KCGEKLVDNF FTQGIQPGLT LSDRYLIVRQ VGQGGFGRTY 
LAEDINRFRE LCILKEFSPQ VQTAYVLQKA EELFQREAKV LHQLQHPQIP RFREIFRVNL
AGKEYLFLVQ DYVEGETYSG LLNQRIQQGL RFTEAEIRQL LQQILPVLDY IHSLGVIHRD
ISPDNLILRS VDKLPVLIDF GGVKQVVAVV ASQYYQPGVV ASPPAATLLG KVGFAPPEQM
QTGNVSPHSD LYALAVTAVV LLTGKQPQEL LDTYNLSWNW RREISLSPIF GQVLDKMLAA
RPGDRYQSAQ QILHALNPAP VNYPPTQPPI PTPLPTPPPV STPDTIAVAP SLPTPDISPA
PQRKNWLIPT AAFLLVGTVG LVWLGMSNSD RNSISVDPTP TPTETQPTNP LDKYSPAERQ
RKQTLNDRRQ QLGIDFNFYI NVVNQIFWDR NPSERGRTLS DGAEDENLRT EWDAVAAELL
DKLKPLSNRA RRQLGTYTAA ERDRWKVEVN QINVGSRSLY DLGDAAFFRA FPEQKGKNFI
EQPIGQVWQA FVSDKLSAIV AGTVFQKIVF DPGATSKTVS GTLQPAGGRV FIADLAQNQS
LELQLQANSK VLLSVYSPSG KTIFLEDSEK RSLSTELPES GFYEFVVVST ASTSADYQLT
LTVENPTPPP EPTPTPSETT TPTPTPSETP TETPTPTPTT AP