Gene Ava_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0219 
Symbol 
ID3683022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp278110 
End bp279801 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content42% 
IMG OID637715547 
ProductSerine/threonine protein kinase 
Protein accessionYP_320740 
Protein GI75906444 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00178483 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTT ATTGCAGTAA GCAACACGCA AATAATGGCG GTAATCGTTT TTGTACTCAC 
TGTGGTGAGC CTTTACCGCT TGCTGTGAAG CAAGTTGTAG ATAATCGCTA TCGCATCATA
CGTCAATTAG GACAGGGTGG TTTTGGACGC ACTTATTTAG CTGAAGATAT TAAAAAATCT
CATAAAACTT GTGTACTGAA GGAATTTGCA CCCCAAGTAG AACACAAAGA GGATTTACAA
AAAGCCAAGG AGTTGTTTGA GCGAGAAGCA AATGTTCTCA AGAAACTCCA GCATTCCCAG
ATTCCCCGTT TTCACGGTTC CCTACAAGCC AAGATTGGTA CTAAAGATTT CTTCTTTTTA
GTACAAGATT ATGTGGAGGG TGATAATTAT CTCCAACTTT TAGAACAGCG TCAAACTCAG
GGGAAAACTT TTACTGAAGA AGAAGTGATT ACTCTATTAC GGCAAATTTT ACCTGTTTTG
ATTTATATTC ACTCTCAAAA CACTGTTCAC CGCGATATTT CCCCCGATAA TTTGATTTTG
CGCCGTTCTG ATAATTTACC AGTACTCATT GACTTTGGCG GTGTGAAACA ATTACCAGCG
TCTCAGGGTT TCTGGTCTAC CAAGTTGGCT GGTAATAATA CTTTGTTAGG TAAAAAAGGT
TACGCACCAG AGGAACAACT ACGTCAGGGA AAAGTATTTA TAAACAGCGA TTTATACTCT
TTGGCGGTGA CGGCTCTAGT CTTACTCACA GGTAAAGAAC CACAAAAATT ATACGACAGC
TATCAGGGTG TTTGGCGTTG GGGGAAAGAA ATCAACGCCA GTATTCAACT AGAATCTGTG
TTAAAAAGGA TGCTTGCTTA TAAGCCAGGC GATCGCTATC AAAATGCAGC ACAAATCCTC
ACCGACTTAC CCTCACCCTC ATCCCTCACT AAGCCGCCAA CTACCCATCT CACTAAGATT
AAGACGATGG TAGTGTCTCC CGGACGCAAG GTAACAGTTC TCGCGGGTAA ACTACACAAC
AAAACTCAAG CAGTGAGCCA AAAGTTACCT TTACCTGTTT GGCTACGTCC TTTCGCCGTT
AGTTTTGGGG GAACAGCTTT AGTTGTCTTA ACTGGTGCAG GTACTTGGGC ATTAGTAAAT
TCCGTAGTTC GAGGGGTATC TTCAATCACG ATTCCTTCGA TTTCCTTACC CGAATTACCA
TCCTTACCCA ACCCACTAGC CCAACCAGTC AGCGACAAAA ACAAAACTAG TAGCAGTGAA
GTTCTCAGCC GTCGTCAACA GCTAGAAATC CCCGAAACAT TTTTTATTCA GATCACAGAT
AGCTTATTCT ATGCTCAAAA GCCAGAATTA AAAGGACGTA GCCTCACATC AAAACCAGAA
GATGCACCGC TAAGAGATCA ATGGCACGCT GTCGCTGGTG AATTTTTGAA TAAAATAGAA
CAAGCGAACC TCAGTACAGC AGCTCGGCGC AAACTGGGAA GCTATACCCA AAAAGACTAT
GAAAACTGGA GAAGACAAGC ACGTTCTGGA CAACTAGGAA ATTACACAGC TAGCCAACTA
AATAAAGACA CAAATGAAAA ATTTGATCAG TTGTTTCCTG GTCAGCAGCG TGGGAAACTG
AATCAACAAA CTTTTGGTCA AGTTTGGTAT GCGATCGCAG CTGATCAAGT AAGTAAAGCA
CAATCTAAGT AG
 
Protein sequence
MQVYCSKQHA NNGGNRFCTH CGEPLPLAVK QVVDNRYRII RQLGQGGFGR TYLAEDIKKS 
HKTCVLKEFA PQVEHKEDLQ KAKELFEREA NVLKKLQHSQ IPRFHGSLQA KIGTKDFFFL
VQDYVEGDNY LQLLEQRQTQ GKTFTEEEVI TLLRQILPVL IYIHSQNTVH RDISPDNLIL
RRSDNLPVLI DFGGVKQLPA SQGFWSTKLA GNNTLLGKKG YAPEEQLRQG KVFINSDLYS
LAVTALVLLT GKEPQKLYDS YQGVWRWGKE INASIQLESV LKRMLAYKPG DRYQNAAQIL
TDLPSPSSLT KPPTTHLTKI KTMVVSPGRK VTVLAGKLHN KTQAVSQKLP LPVWLRPFAV
SFGGTALVVL TGAGTWALVN SVVRGVSSIT IPSISLPELP SLPNPLAQPV SDKNKTSSSE
VLSRRQQLEI PETFFIQITD SLFYAQKPEL KGRSLTSKPE DAPLRDQWHA VAGEFLNKIE
QANLSTAARR KLGSYTQKDY ENWRRQARSG QLGNYTASQL NKDTNEKFDQ LFPGQQRGKL
NQQTFGQVWY AIAADQVSKA QSK