Gene Ava_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0178 
Symbol 
ID3683136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp231996 
End bp232730 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content46% 
IMG OID637715505 
ProductABC transporter-like 
Protein accessionYP_320699 
Protein GI75906403 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3638] ABC-type phosphate/phosphonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.18822e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0540962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATT ACGTAATTGA ATGTCACAAC TTAGAGACAG CTTATGTTGG CTCTTTGAAT 
CGCCCCATCC TCAACGAGAT TAGTTGTCAC ATCAAACAGG GTGAATTTGT TGTACTGCTA
GGACTCAATG GAGCTGGTAA GTCTACGTTA TTGCGATCGC TGGTTGGGTT AGTGCCATTA
GTCAAGGGAG AAGTCCACAT CAACGGCGTA GCAATGAATA GCCGCATACT TCCCCAAATT
CGCCGTGATG TAGGAATGTT GTTTCAAGGC GGTGGTTTGA TTCCCCAGTT ATCAGCCATT
GAAAATGTAT TGTGCGGTAG ACTTGGCACG AGAACAACTT GGCAGACATT ATTTGGCTTT
CCCAAACGCG ATCGCCTATT GGCATTAGAA TTACTCGAAC AGTTGGGTTT AAGAGAGTTA
GCTTACCAAA GAACTAGCAA ACTCAGTGGT GGACAACAAC AAAGAGTAGC GATCGCTCGT
GCTTTAATTC AATCACCGCA AATACTCCTA GCCGATGAAC CCACAACGGG ATTAGATGTC
ATCGCCACCC AACAAGTAAT GGAGACCTTA GCGGAATTAC ACACCCAGCA AGGTATGACA
GTTGTCGCAG TTCTGCATGA TTTGGGAATG GCTGCCAGAT ATGCCCAACG AGCGATCGTT
CTAGATGCCG GACGCATTGT TTACGAGGGT TCCTGCGATA ACCTGCAAGC ACAGTTTGTG
GTAAATAGTC AATAG
 
Protein sequence
MSDYVIECHN LETAYVGSLN RPILNEISCH IKQGEFVVLL GLNGAGKSTL LRSLVGLVPL 
VKGEVHINGV AMNSRILPQI RRDVGMLFQG GGLIPQLSAI ENVLCGRLGT RTTWQTLFGF
PKRDRLLALE LLEQLGLREL AYQRTSKLSG GQQQRVAIAR ALIQSPQILL ADEPTTGLDV
IATQQVMETL AELHTQQGMT VVAVLHDLGM AARYAQRAIV LDAGRIVYEG SCDNLQAQFV
VNSQ