Gene Ava_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0175 
Symbol 
ID3683133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp229196 
End bp229366 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content44% 
IMG OID637715502 
ProductCAB/ELIP/HLIP-related protein 
Protein accessionYP_320696 
Protein GI75906400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000121153 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0293662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAA CACAGCCAAC AGTCACACCC AAGCTAGAAG AGCCAAAATT TGGCTTCAAT 
GAATATGCAG AACGCTTGAA TGGTCGCGCT GCAATGATTG GTTTTCTTTT GATGGTAGTC
ATTGAATATG CCACCAATCA AGGTGTCTTG TCCTGGCTCG GACTTAAGTA A
 
Protein sequence
MSQTQPTVTP KLEEPKFGFN EYAERLNGRA AMIGFLLMVV IEYATNQGVL SWLGLK