| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0167 |
|---|
| Symbol | |
|---|
| ID | 3683247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 220430 |
|---|
| End bp | 221302 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637715494 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320688 |
|---|
| Protein GI | 75906392 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5464] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.972889 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGTG ACTCCATCTT TTACAAATTA TTCAAGCAAT TTCCCGGTTT GCTGTTTGAA
TTACTAGACC AACCACCCCC ACAAGCTGAT GGGTATCAGT TTGAATCGGT CGAGGTTAAA
GAAACAGCAT TTCGGATTGA TGGCGTGTTC CTACCCCCCG CCAATGCAGC TTCTAAGGTT
GTGTTCTTTG CTGAAGTTCA GTTTCAAAAG GATGACGACC TATATCATCG CTTTTTTAGC
GAATTGTTTT TGTTTCTCTA TCGCCATACC ATTCGTTACG ATGACTGGTT TGGGGTCATA
ATTTATGCCT CGCGCAGCCT GGAACCTTCA AATACAACAA TTCATAGAGC ATTACTAGAA
AGTGGTCAAG TGCGGCGGGT ATATCTTGAT GAGTTAGGGG ATTTGCGACA ACAACCCTTA
GGATTAGGCT TGATGCTGCT GACAACCATT CCGGAAACAG AAGCAGTAGA ATCAGCAAGA
TTTTTGCTGG AGCAAGCACA ACAACAAGAA GTAGACATCT TGTCTTCACG AGCGATAATA
GATTTAGTGA CGACAATTAT GGTCTACAAA TTTGCTACCT TAAGTCGAGA GGAAATTGAA
GCGATGCTGG GACTAAAGTT GGAAGAAACA AGAGTTTATA AAGAAGCGAA ACAAGAAGGA
CGAGGCGAAG GACGGGAAGA AGGACGGGAA CAAGAGGCGC GATCGCTTAT TCTCCGACAA
CTAAACAAAC GAGTAGGCGC AATTCCCGAT GAACAGCAAC GCCAGATTGA GGTTTTATCT
CTAGAACAGT TAGAGGCTTT AGCTGAGGCG TTGTTAGATT TCTCGACTAT CGCCGATTTG
GTAGGGTGGT TGCAAAATCA AGCTACAAGA TAA
|
|---|
| Protein sequence | MRRDSIFYKL FKQFPGLLFE LLDQPPPQAD GYQFESVEVK ETAFRIDGVF LPPANAASKV
VFFAEVQFQK DDDLYHRFFS ELFLFLYRHT IRYDDWFGVI IYASRSLEPS NTTIHRALLE
SGQVRRVYLD ELGDLRQQPL GLGLMLLTTI PETEAVESAR FLLEQAQQQE VDILSSRAII
DLVTTIMVYK FATLSREEIE AMLGLKLEET RVYKEAKQEG RGEGREEGRE QEARSLILRQ
LNKRVGAIPD EQQRQIEVLS LEQLEALAEA LLDFSTIADL VGWLQNQATR
|
|---|
| |