| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0136 |
|---|
| Symbol | |
|---|
| ID | 3683275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 180184 |
|---|
| End bp | 180978 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637715463 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320657 |
|---|
| Protein GI | 75906361 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000036691 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTGG TTTGGCAAGC AGATTTTTAT CGCAGTCCTC AGCAAGATTT AGACGGAAAA
ATCTTGTGGG AGTTATTAAT TTGTGATGTA AATCGTGGTT TCGAGTATAC GGCGACTTGT
CCCCAGTCAG AAGCTAATTC CAGTTGGTTG ACTAGCCAAA TTCAATTAGC AGCAGGTGAA
AAACTACCAG ATATTATCCA AGTTTTTCGC CCCCAGTCTT TGAGTTTGAT TGAGGCTGCT
GGACGCAATT TGGGGATTAA TGTCGAACCG CAACGCCAAA CCCCAGCTTT GAAACAATGG
TTACAAGAAA AGCAATATTC CATAGCAATA GATAAGCCAC CACCAACACC GTTACCAGAT
AACTTATGGG GTGATGAGTG GCGCTTTGCT AGCATCCAAG CGGGTGACGT CGTTGATTTG
TTTAGCGATC GCCCAATCCC CATTTTATCT TTACCAGAAC CCCTCAAACC CATTAATTTA
GGCTTGGCAT CAACAGTGGC AATTCCTGGT GTGGTAATTT ATGGTGGTAG GCGATCGCTA
AATCTAGCTA GATGGATTGC CCAAACCCGC CCAGTAGCCT TGAATTATAT TGCTGGTGCG
CCTGATGGTT TGATACTGGA AGCTGGTTTG GTGGATAGAT GGATTTTAGT TACTTTTGAA
GATGCAGAAG TAAAGGCGGC TGCAAAAGTT TATGAACAAC GCCAAAAACA AAGTCGGGGA
TTACATTTTT TATTAGTACA GCCTGATGAT TCAGGTATGA CTTACACTGG CTTTTGGTTG
TTGCAAGCAA TATAA
|
|---|
| Protein sequence | MTLVWQADFY RSPQQDLDGK ILWELLICDV NRGFEYTATC PQSEANSSWL TSQIQLAAGE
KLPDIIQVFR PQSLSLIEAA GRNLGINVEP QRQTPALKQW LQEKQYSIAI DKPPPTPLPD
NLWGDEWRFA SIQAGDVVDL FSDRPIPILS LPEPLKPINL GLASTVAIPG VVIYGGRRSL
NLARWIAQTR PVALNYIAGA PDGLILEAGL VDRWILVTFE DAEVKAAAKV YEQRQKQSRG
LHFLLVQPDD SGMTYTGFWL LQAI
|
|---|
| |