Gene Ava_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0130 
Symbol 
ID3683347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp173505 
End bp175091 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content43% 
IMG OID637715457 
Productpeptidase M48, Ste24p 
Protein accessionYP_320651 
Protein GI75906355 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA TCAGTAAGTC TCTGCTGCTA ACCTTGAATT GGATATTGTT GTCAGTTGGG 
ACAACACTAT TAATTCTTCT CACTCAACCG ATAGCACCAG TACCAGCCCA GGAACCTCCC
GCCCCCACTG AGCAAACGAA CACACCCCCG CCGGAAAATC CCAATGATCA AAAGCTCAGA
GATGCACTAA AACGCTCATC TGCGTCAGAA CCCCCACTCA GTCCAGAAGA AATTGCCCGT
CAACAAAAAC TCATAGAAGC AGATAAACTT TATTTGGCGG GACAAATTGC CGAGGCGGAA
AAAATTTACC GCGAAGTTAA AACACCATTT ACTCAAACAT CTGCATCCAA AGAACGAAAG
CCAGCCATCC TTAACCCAAT AGAACTTTCA CCAGCAGGTA AAGTCTATTG GCGAGAAGCA
GAGGCGGGGA TAGCCAAGAA ATTGCAAACC CGAACTTTAG TACCTCTGCA ATTATTAGTG
GAACAATACC CCGAATTTAT CCCTGGACAT ATTCGCTACG CTGAGGTTCT CACCCAATAC
GATCGCCAAA CAGAAGCATT AGACATTTTA GAACGGGCAT CATCTCTTTA TCCCAATCAA
CCAGAATTAA CTCAAGCCAG AGTTAGCGCC TTGGCTGAAT CCAAGAAATG GATGGAAGCA
TCTTTAGCTG CAAGGCAATT TGCTATCCTC AATCCTAACA ATCCCCAAGC ACCAGAATTT
ACCCAATTAG CCGAGAAAAA TCTTCAACGC TATCAATCCT ACGTTCGAGA GGAAATTAGG
GGTAATTTAA TTAGTAACGT CATTACAGGC GCTTTGGGTT ATGCGGTTAC GGGTAGTTTA
CTGGGGCCGT TTTCTGCCCT TGACTCCACC ATTTTGCTAC TACAAGGCGA AAAATCTATC
GGTGAATCAG TAGCAAAACA GGCTAAAAAA CAGCTGCCTT TAATCATAGA CGATGATATC
TTAGCCTACA TCAATGATAT TGGGCAGAAA CTAGCGAAAG TTGCTGGTAG AAATGAATTT
AAATACGAAT TTTTTGTGAT TCCTGAAGAA GAACTCAATG CCTTTGCCTT ACCTGGAGGG
AAAATTTTTA TTAATGCTGG TGCGATCGCC AAAACCACTT CCGAAGCAGA ATTAGCGGGA
TTAGTAGCAC ATGAATTATC TCATGTCGTC TTATCCCACG GCTTTCAATT AGTTACCCAA
GGCAACCTCA TCTCTAACGT TACTCAATAT CTACCCTTTG GTGGCACGAT TGGGCAACTT
TTCGCCATGA ATTACAGCCG GGATATGGAA AGACAGGCAG ATATTTTGGG TACACGCTTA
ATTGTTGCTA GTGGCTATGC TGCTGATGGC TTGCGGAATT TAATGGTGAC ACTAGACAAA
CAAAAAAAAT ATGACATTCC CACTTGGTTA TCTTCCCACC CAGGCGGTAA TGAGCGAGTT
AGTTATCTAG AAAACTTAAT TTCTCGCAAT AGTTATAACC GCTACGCTTA TGAAGGTGTA
CAACGCCATG CAGAAATTAA AGTTAAAGTG AACAAACTCC TCAAACAGAA AAAAGAGGAA
GAAGAAAAAA AGCACACTAC GGAATGA
 
Protein sequence
MKRISKSLLL TLNWILLSVG TTLLILLTQP IAPVPAQEPP APTEQTNTPP PENPNDQKLR 
DALKRSSASE PPLSPEEIAR QQKLIEADKL YLAGQIAEAE KIYREVKTPF TQTSASKERK
PAILNPIELS PAGKVYWREA EAGIAKKLQT RTLVPLQLLV EQYPEFIPGH IRYAEVLTQY
DRQTEALDIL ERASSLYPNQ PELTQARVSA LAESKKWMEA SLAARQFAIL NPNNPQAPEF
TQLAEKNLQR YQSYVREEIR GNLISNVITG ALGYAVTGSL LGPFSALDST ILLLQGEKSI
GESVAKQAKK QLPLIIDDDI LAYINDIGQK LAKVAGRNEF KYEFFVIPEE ELNAFALPGG
KIFINAGAIA KTTSEAELAG LVAHELSHVV LSHGFQLVTQ GNLISNVTQY LPFGGTIGQL
FAMNYSRDME RQADILGTRL IVASGYAADG LRNLMVTLDK QKKYDIPTWL SSHPGGNERV
SYLENLISRN SYNRYAYEGV QRHAEIKVKV NKLLKQKKEE EEKKHTTE