| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0124 |
|---|
| Symbol | |
|---|
| ID | 3683341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 165708 |
|---|
| End bp | 167120 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637715451 |
|---|
| Product | response regulator receiver Signal transduction histidine kinase |
|---|
| Protein accession | YP_320645 |
|---|
| Protein GI | 75906349 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA ATAATAACAA TAAATATAAA GGCAATATTT TGGTAGTAGA TGATACACCA
GATAATCTGC GGCTGTTATC AGCGATGTTA ACTGCACAAG GTTTTGAAGT CCGCAAAGCT
TTGAATGGTA AAATGGCGCT AACTGCGTGT CAGATGCTTT TACCTGATGT CATTTTGCTG
GATGTTAATA TGCCGGAGAT GGATGGTTAT CAAGTTTGTC AGCAACTGAA AGACGATGAA
CACACATCTG ACATACCAGT GATATTTATT AGCGCGCTGG ATGATGTTCT AGATAAAGTA
AAAGCTTTTG ACGTTGGTGG TGTAGACTAT ATTACTAAAC CCTTTCATGG TGCAGAAGTA
ATCTTAAGAA TTGAAAATCA AATAAATTTA CGGTTGTTGC AACTTCAATT ACAAGAAAGA
AATCTCTTAT TGCAAGATGC CCTGAATAAT TTAAAAGCCT CACAGGTTCA ACAAATTCAA
AATGAGAAAA TGGTGGCACT GGGGCAATTA GTAGCAGGTA TTGCCCATGA AGTTAATAAC
CCCATTAGTT TTATCTATGG CAACCTGCAA TATGCCAATG AGTATATCCA AGATTTAGTG
AAGATCATTG AAGTTTATCA ACAGGAGTAT CCAAATCCCA CACCCAAAAT TCAACAACTC
ATTCAAAAGA CAGACTTGAA TTTTGTCATG CAAGACCTGC AAAACTTAAT GGGTGCTATG
TACAGAGGAT CTGATCGGAT TCGGGAAATT GTGCTGGCGC TGCAAAACTT TTCCCGCCAT
GACGAAGCGG AAATGAAACT GGTAGATATT CATCAGGGAA TAGACAGCAC CTTGGTGATG
TTACAGCATC GACTCAATGC CACGTCAAAT CGTCCAGCAA TTGATGTAGT TAAAGATTAT
AGTAACTTAC CTTTGATTAC TTGTTATCCA AGCGAATTAA ACCAAGTATT TATGCACATC
TTAAATAATG CCATAGATGC TTTGGAGGTG AGGGAGGAAA CTGATTCTGG CGTAATACCA
ATGACTCCCA GACTGCGCTT ACAAAGTAGC CAAGTCAATC CTCTGTGGGT AAGCGTTCGT
CAAGGAACAT CTCATCTACA GTCATTGGGA ATCACCAAAA TTAAGGAAGA ACTCCCAAAC
CAAAATCCTC AAATTCGCAT TAGCACAGAA TTACTCGACT CACACACTGT GAGGATTGCG
ATCGCCGATA ATGGTGTAGG TATAGATCAA TCTTGGCAAT CTCATCTGTT TGACCCATTT
TTCACCACAA AAACCGTAGG TAAAGGTAGT GGCTTGGGAT TATCTATCAG CTATCAGATT
GTAGTGCAGA AACACCAAGG GCAAATCACC TGTGCTTCTG CATTAGGCGA AGGAGCAGAG
TTTGTCATTA CAATTCCCAT TACCCCAGCC TGA
|
|---|
| Protein sequence | MNLNNNNKYK GNILVVDDTP DNLRLLSAML TAQGFEVRKA LNGKMALTAC QMLLPDVILL
DVNMPEMDGY QVCQQLKDDE HTSDIPVIFI SALDDVLDKV KAFDVGGVDY ITKPFHGAEV
ILRIENQINL RLLQLQLQER NLLLQDALNN LKASQVQQIQ NEKMVALGQL VAGIAHEVNN
PISFIYGNLQ YANEYIQDLV KIIEVYQQEY PNPTPKIQQL IQKTDLNFVM QDLQNLMGAM
YRGSDRIREI VLALQNFSRH DEAEMKLVDI HQGIDSTLVM LQHRLNATSN RPAIDVVKDY
SNLPLITCYP SELNQVFMHI LNNAIDALEV REETDSGVIP MTPRLRLQSS QVNPLWVSVR
QGTSHLQSLG ITKIKEELPN QNPQIRISTE LLDSHTVRIA IADNGVGIDQ SWQSHLFDPF
FTTKTVGKGS GLGLSISYQI VVQKHQGQIT CASALGEGAE FVITIPITPA
|
|---|
| |