Gene Ava_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0112 
Symbol 
ID3683387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp149795 
End bp150790 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content46% 
IMG OID637715439 
Producthypothetical protein 
Protein accessionYP_320633 
Protein GI75906337 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.379229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0624831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACGG CGATTCTTCC CGCTTTTGCT GCTACCGCTA ATCCCTGTCC TCCAGAAATG 
GTAATGATTC CCGGCGGGAC ATTTACGATG GGATCGGATA ATTCCGGTTA TATAGAAGAA
CTCTCAGCAC AAGAGGTAAG AGTTAGTTCT TTTTGTATAG ATAAATACGA GGTCACAAAT
TCCCAATTTG CAGAGTTTGT CAAAGCGACG GGCTACGTCA CAGTTGCAGA GCGTCCTTTA
TCAAAGGAAC AGTTTCCCGA CTTGCCAGAT GAGCAGAGAT TACCGGGTTC TTTAGTGTTT
GCAATAGTAC AGCCAGAAGC AAAAGTACTG AATTGGTGGC ATTGGCAGAC TGGGGCAAAT
TGGCGACATC CCTTTGGCAA AGAAAGCGCA ATTGTACATC AAGATAACTA TCCAGTTGTT
CATATTGCTT ACGAAGACGC TGTAGCTTAC GCCCAATGGG CAGGAAAATC GCTACCTACA
GAAGCTCAGT GGGAATACGC TGCCCGTGGT GGGTTAGATG CTGCAACTTA TGCTTGGGGT
GACCAATACT CGGAGAAAAA AGCCAACACT TGGCAAGGAA TATTTCCCTT GTTCAATACC
AAAAAAGATG GTTACGCAAG TATTGCCCCT GTTGGTTCCT TTCCACCAAA TGGTTATGGA
CTTTATGACA TGACTGGTAA CGTCTGGGAA TTAACATCCG ATTGGTTTAT GCCAGGACAT
AACCACAAAA CCCACAGTGT TAATCCTACA GGCCCGGAAC AAAGTTTTGA CCCCAATAAA
CCCAGCGAAC AAGCCCTACA CGTAATTAAA GGTGGTTCTT ATCTGTGTGC GCCTAACTAT
TGCAGCCGTT TCCGTCCCGC AGCGCGAGAA TCTCAAGCGC CGGATACGGG AACAACTCAT
ATCGGATTTC GCTTAGTAAA GAACCTAACA CAAGAGAGCA GGGGAGGCAG GGGAAGAAGA
GAAGCAGGGG AGGAGAAAAA TATATCTCCT GCTTAA
 
Protein sequence
MSTAILPAFA ATANPCPPEM VMIPGGTFTM GSDNSGYIEE LSAQEVRVSS FCIDKYEVTN 
SQFAEFVKAT GYVTVAERPL SKEQFPDLPD EQRLPGSLVF AIVQPEAKVL NWWHWQTGAN
WRHPFGKESA IVHQDNYPVV HIAYEDAVAY AQWAGKSLPT EAQWEYAARG GLDAATYAWG
DQYSEKKANT WQGIFPLFNT KKDGYASIAP VGSFPPNGYG LYDMTGNVWE LTSDWFMPGH
NHKTHSVNPT GPEQSFDPNK PSEQALHVIK GGSYLCAPNY CSRFRPAARE SQAPDTGTTH
IGFRLVKNLT QESRGGRGRR EAGEEKNISP A