Gene Ava_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0108 
Symbol 
ID3683383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp144254 
End bp145258 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content44% 
IMG OID637715435 
Productaldo/keto reductase 
Protein accessionYP_320629 
Protein GI75906333 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00484238 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCAAAT ATGTAAATCT TGGCAAAACT GGACTCAAAG TATCGCGTAT TACTCTAGGT 
ACGATGACTT ATGGCTCGCG TAAATTGCGC GAATGGGTAT TAGAAGAAGA AGAGAGTCGT
CCATTTATCA AACTGGCTTT GGAATTGGGG ATTAACTTCT TTGATACCGC CGATGTTTAT
TCCTTGGGTG CTAGTGAAGA AATCGTCGGG CGAGCGCTAA AAGACTTTGC CAAAAGAGAT
CAGGTTGTGA TTGCTACTAA AGTACATGGT AAAGTCGGCG ATGGCCCCAA CGACCGAGGG
CTATCTCGCA AACATATTTT TGATAGCATT GATGCTTCTT TGCGACGGCT ACAGACCGAT
TATGTAGACT TGTACCAAAT TCACCGTTGG GATCATGAAA CACCAATTGA AGAAACCCTA
GAAGCACTGC ATGATATTGT CAAAGCAGGT AAAGTCCGTT ATCTAGGAAT TTCTAGTGTT
TACGCATGGC AATTTGCCAA AGCCCTTTAT ACCGCAGATA TCCACGGTTG GACTCGTTTT
GTCTCCATTC AAAATCACTA CAATCTAGTC TATCGGGAAG AAGAAAGAGA AGTGATACCC
TTAGCCCTAG ATCAAGGGAT TGGTATTATT CCTTGGAGTC CCTTGGCACG GGGATTTTTA
GCAGGAAATC GCAGTAAGTC AGACTATGGG CAAACACTAC GGGCAAAAAC TGACGAATTC
GCTCACAATC TCTACTATCA AGATTCAGAT TTTCAAGTAG TCGATCGCGT AGTAGAATTA
GCCGCAACAC GAGGTGTTAA ACCCACACAA ATCGCCCTAG CTTGGCTATT ACATCAACCA
GGTGTAACAT CTCCCATCAT TGGCGCTAGT AAGATAGAAC ATCTGAAAGA GGCTGTCGAG
GCGGTGGATT TAGAGCTTTC TGATGAAGAG CGTAAATACC TGGAAGAACC TTACACACCC
CATCCCATCT TAGGGCATCA GTACCCTTTG GGAAATCGTC CGTAG
 
Protein sequence
MIKYVNLGKT GLKVSRITLG TMTYGSRKLR EWVLEEEESR PFIKLALELG INFFDTADVY 
SLGASEEIVG RALKDFAKRD QVVIATKVHG KVGDGPNDRG LSRKHIFDSI DASLRRLQTD
YVDLYQIHRW DHETPIEETL EALHDIVKAG KVRYLGISSV YAWQFAKALY TADIHGWTRF
VSIQNHYNLV YREEEREVIP LALDQGIGII PWSPLARGFL AGNRSKSDYG QTLRAKTDEF
AHNLYYQDSD FQVVDRVVEL AATRGVKPTQ IALAWLLHQP GVTSPIIGAS KIEHLKEAVE
AVDLELSDEE RKYLEEPYTP HPILGHQYPL GNRP