Gene Ava_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0107 
Symbol 
ID3683382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp142731 
End bp144002 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content43% 
IMG OID637715434 
Producthypothetical protein 
Protein accessionYP_320628 
Protein GI75906332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0053883 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAATTT GGCATAGAAA ATTCGGGGAA AGCATCGGTA ATATCACGTA CCACCATTTA 
CCTGCTTTAC GCTGGCGTAA CTTTCGCCTG TTTTTTGGCG GACAGTTACT ATCAATGTCT
GGGACATTTA TGACCCAGCA GTTAACTATT CCTTGGTTAG TATATGATTT GACTAAATCT
GCTTGGCTAT TGGGAGTTGC AGGGTTTGTA CAATTTTTAC CTACCTTATT ATTGATTCCC
TTTTCGGGCA TATTATCCGA TCGCTGGAGT CGTCGTGACT TGTTAATGTT GGTGCAGATA
TTGGGAATTA GCGTTTCCTT GGCGTTAACG ATTCTCACCT TTACCAATTG GATTACCTTT
CCTATCCTAT TGGTGCTAAG TGCGCTCAAT GGTTTGCTTA AGGGATTAGA TATGCCTGTG
CGCCATACAA TCGTCACCGA AACCGTAGAC GATCGCGCTG ATTGGAGTAA TGCGATCGCT
TTGAATTCAG TGATGTTAAG TTCCTCTCTA GTATTGGGGC CTGCTATGGG CGGAATTTTG
ATTGCTACGC TAGGGGTAAA ATATTGTTTT CTCTACGACA CCCTCAGCTA TATCCCTGCA
ATCTTTACTC TACTAGCTAT GCAGTTGCCT GTCAGACCGA TGCAATCCCT GTCAGGAATT
AGCAATACTT TACAGAAATT GGGGGAAGGT TTTGAATATG TCTCCAAATT CCAGCCGATT
AGAGCCATTT TATTAATGCT AGCGTTACAT GGTTTAGTTG GGATGTCTCA TATCGCACTC
ATGCCAGTAG TCGCGGCTAA AATTTTAAAT GGGGATGCAA CTACAATGGC TCACCTTAGC
ACTTCAGCCC CGATTGGTTC TTTGCTCGCT TGTTTATATC TAAGTATCAG GCGAGGGATT
GCAGGTTTAG AGCGTTTGAT TGTAGCTGCT CAAATCTCGA TTGGCATAAG TCTGATCTGC
TTCTCTCTAT CGCGTCAAAT TGAACTATCC ATCATCATAC TGGTATTTAT CGGCTGCTTT
GCCATTCTAC AGATTACGAG TAGCAATATG ATTATCCAAA CCTTAGTTGC TGAGGATAAG
CGCGGACGGG TAATGAGTTT TTATGCCTTA GCAATGGTGG GTACAATGCC CTTCGGGAAT
TTGTTCGCTG GAACTTTGGC AGATAATTTT GGTGCGACTA ATGCCTTGAT TGTCTGTGGT
AGTCTGAGTA TTTCAGGTGC GCTCTGGTTC TCTTCACAAT TGCCAGCTGT AAGCCGTTGG
ATTGCTCGAT GA
 
Protein sequence
MKIWHRKFGE SIGNITYHHL PALRWRNFRL FFGGQLLSMS GTFMTQQLTI PWLVYDLTKS 
AWLLGVAGFV QFLPTLLLIP FSGILSDRWS RRDLLMLVQI LGISVSLALT ILTFTNWITF
PILLVLSALN GLLKGLDMPV RHTIVTETVD DRADWSNAIA LNSVMLSSSL VLGPAMGGIL
IATLGVKYCF LYDTLSYIPA IFTLLAMQLP VRPMQSLSGI SNTLQKLGEG FEYVSKFQPI
RAILLMLALH GLVGMSHIAL MPVVAAKILN GDATTMAHLS TSAPIGSLLA CLYLSIRRGI
AGLERLIVAA QISIGISLIC FSLSRQIELS IIILVFIGCF AILQITSSNM IIQTLVAEDK
RGRVMSFYAL AMVGTMPFGN LFAGTLADNF GATNALIVCG SLSISGALWF SSQLPAVSRW
IAR