Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0107 |
Symbol | |
ID | 3683382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 142731 |
End bp | 144002 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637715434 |
Product | hypothetical protein |
Protein accession | YP_320628 |
Protein GI | 75906332 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0053883 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAATTT GGCATAGAAA ATTCGGGGAA AGCATCGGTA ATATCACGTA CCACCATTTA CCTGCTTTAC GCTGGCGTAA CTTTCGCCTG TTTTTTGGCG GACAGTTACT ATCAATGTCT GGGACATTTA TGACCCAGCA GTTAACTATT CCTTGGTTAG TATATGATTT GACTAAATCT GCTTGGCTAT TGGGAGTTGC AGGGTTTGTA CAATTTTTAC CTACCTTATT ATTGATTCCC TTTTCGGGCA TATTATCCGA TCGCTGGAGT CGTCGTGACT TGTTAATGTT GGTGCAGATA TTGGGAATTA GCGTTTCCTT GGCGTTAACG ATTCTCACCT TTACCAATTG GATTACCTTT CCTATCCTAT TGGTGCTAAG TGCGCTCAAT GGTTTGCTTA AGGGATTAGA TATGCCTGTG CGCCATACAA TCGTCACCGA AACCGTAGAC GATCGCGCTG ATTGGAGTAA TGCGATCGCT TTGAATTCAG TGATGTTAAG TTCCTCTCTA GTATTGGGGC CTGCTATGGG CGGAATTTTG ATTGCTACGC TAGGGGTAAA ATATTGTTTT CTCTACGACA CCCTCAGCTA TATCCCTGCA ATCTTTACTC TACTAGCTAT GCAGTTGCCT GTCAGACCGA TGCAATCCCT GTCAGGAATT AGCAATACTT TACAGAAATT GGGGGAAGGT TTTGAATATG TCTCCAAATT CCAGCCGATT AGAGCCATTT TATTAATGCT AGCGTTACAT GGTTTAGTTG GGATGTCTCA TATCGCACTC ATGCCAGTAG TCGCGGCTAA AATTTTAAAT GGGGATGCAA CTACAATGGC TCACCTTAGC ACTTCAGCCC CGATTGGTTC TTTGCTCGCT TGTTTATATC TAAGTATCAG GCGAGGGATT GCAGGTTTAG AGCGTTTGAT TGTAGCTGCT CAAATCTCGA TTGGCATAAG TCTGATCTGC TTCTCTCTAT CGCGTCAAAT TGAACTATCC ATCATCATAC TGGTATTTAT CGGCTGCTTT GCCATTCTAC AGATTACGAG TAGCAATATG ATTATCCAAA CCTTAGTTGC TGAGGATAAG CGCGGACGGG TAATGAGTTT TTATGCCTTA GCAATGGTGG GTACAATGCC CTTCGGGAAT TTGTTCGCTG GAACTTTGGC AGATAATTTT GGTGCGACTA ATGCCTTGAT TGTCTGTGGT AGTCTGAGTA TTTCAGGTGC GCTCTGGTTC TCTTCACAAT TGCCAGCTGT AAGCCGTTGG ATTGCTCGAT GA
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Protein sequence | MKIWHRKFGE SIGNITYHHL PALRWRNFRL FFGGQLLSMS GTFMTQQLTI PWLVYDLTKS AWLLGVAGFV QFLPTLLLIP FSGILSDRWS RRDLLMLVQI LGISVSLALT ILTFTNWITF PILLVLSALN GLLKGLDMPV RHTIVTETVD DRADWSNAIA LNSVMLSSSL VLGPAMGGIL IATLGVKYCF LYDTLSYIPA IFTLLAMQLP VRPMQSLSGI SNTLQKLGEG FEYVSKFQPI RAILLMLALH GLVGMSHIAL MPVVAAKILN GDATTMAHLS TSAPIGSLLA CLYLSIRRGI AGLERLIVAA QISIGISLIC FSLSRQIELS IIILVFIGCF AILQITSSNM IIQTLVAEDK RGRVMSFYAL AMVGTMPFGN LFAGTLADNF GATNALIVCG SLSISGALWF SSQLPAVSRW IAR
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