Gene Ava_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0100 
Symbol 
ID3683375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp133254 
End bp133838 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content43% 
IMG OID637715427 
Producthypothetical protein 
Protein accessionYP_320621 
Protein GI75906325 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.637727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.188122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATTA GTCCTTTGAC ATTAAACCTA GACACCGTCC ACCTCACAGA CGAACAGTTT 
TATGAACTAT GTCAAAATAA CAGTGAATTG AAATTTGAAC GCACTCCTAC GGGGGAATTG
ATAATTATGC CCCCTGTTGG CGGAGAAAGC GGTAATCGAG AAGCAGATTT AATGATTGAC
CTGGGTATCT GGAATCGTCA AACGGGACTC GGTTATACTT TCAGTTCCTC CACTATCTTT
AAATTACCCA ATGGCGCAGA CCGTTCTCCT GATGCAGCGT GGATTCGTCG GGAACGCTGG
GAAGCACTCA CTCCAGAACA AAGACGTAAA TTTCCCCCCA TTGCACCCGA TTTCGTCATT
GAATTAAGGT CAGCAACAGA CGATTTAGAC AAGCTGCGCC AAAAAATGCG GGAATATATA
GATGCAGGGG TGCGGCTAGG ATGGTTAATT AATCCCCAAC AGCAGCAAGT AGAAATATAT
CGTCAAAGCC AAAACGTAGA AATGCAAAAT CTACCCACAG AATTATCGGG TGAAAATGTC
TTGCCAGGAT TTAAGTTGAG TCTACCTAGT TATGACAATT CGTAA
 
Protein sequence
MVISPLTLNL DTVHLTDEQF YELCQNNSEL KFERTPTGEL IIMPPVGGES GNREADLMID 
LGIWNRQTGL GYTFSSSTIF KLPNGADRSP DAAWIRRERW EALTPEQRRK FPPIAPDFVI
ELRSATDDLD KLRQKMREYI DAGVRLGWLI NPQQQQVEIY RQSQNVEMQN LPTELSGENV
LPGFKLSLPS YDNS