Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0094 |
Symbol | |
ID | 3683447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 126211 |
End bp | 128727 |
Gene Length | 2517 bp |
Protein Length | 838 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637715421 |
Product | surface antigen variable number |
Protein accession | YP_320615 |
Protein GI | 75906319 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR00992] chloroplast envelope protein translocase, IAP75 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.39497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.155801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAT CTCCTGTATT GGTGGCGGCT GTAGCAATCA CAGCACCTTT AAGTAGTTCT TTAACTGCAA ATGCCCAAAC TCCTACAAAT TCAGAACAGA CATTAGAGGC GATCGCCCCA GCGACAAATC AGCAGTCAGA ACAAAATGTG AGTTTAGAAT CCCCAGAGGA TTTCACAACT GTCAAGGCGC TGGCAGATAT GCAATCCCCA TCAGGGGAAT TATCGACAGA TAAGTCAACT AAATCCGCAG CAACGACGAA AAAAGATGTG ATTGTACCCA CTGTAGAGAC ATTAGTGGCT ACAAATCCAC CCATGCAAGA GAGCAACTCC GCCAGTAAGA TAGCGCCTGT AGAAATTGGC AAACCAACAT CGAGCGCGGT TTTTAGGAGT CAGTATCAGA CAATAAATTA TGGTAATTAT GGGCGATCGC TGACATCAGG TGTTAGCTCA TCACCATCAC CACAGAAAAA AGCCAATTTA CCCTCCCCAG TTCCTAACCC CCTAGACACC GGAGCGACAA CAGCCAAGCA ACTTGTACAA GCCCCAGAAC AACCTGCACC CCAACCAGAA GTAGCCCCCC CAAGCACCGA GGAACCAGCC CCAGCCCCAG AAACTACTCC AGGGACAGAA AATTTCAACA CTCCTAACGC CACACCTGAA ACCACAGAAC CCCGTGTATT AGTTTCAGAA GTCCTCGTGA GACCGCAATC AGGACAACTA ACTCCCGAAT TAGAAGCCCA AGTTTACAAC GTAATTCGCA CTCAACCAGG ACGGACAACC ACCCGTTCCC AGTTACAAGA AGATATTAAT GCCATCTTTG GCACAGGCTT TTTCTCCAAC GTCCAAGCAT CACCAGAAGA CACACCATTA GGGGTGCGAG TCAGCTTTAT CGTCCAGCCC AACCCCGTCT TAAGCAAAGT AGAAATTCAA GCCAATCCTG GTACTAACGT TCCCTCAGTA CTGCCCCAGG CTACTGCTGA TGAAATTTTC CGCCCCCAGT ATGGCAAAAT TCTCAACTTG CGGGATTTAC AAGAAGGGAT TAAAGAATTA ACCAAACGTT ATCAAGACCA AGGTTATGTT CTCGCCAATG TTGTAGGCGC GCCCCAAGTT TCCGAAAATG GAGTTGTCAC CCTGCAAGTA GCTGAAGGAG TTGTTGAGAA TATTAGCGTC CGCTTTCGCA ACAAAGAAGG ACAGGATGTC AACGAACAAG GACAACCAAT TCGGGGACGG ACACAGGACT ATATCATCAC GCGAGAAGTG GAATTGAAAC CAGGACAGGT ATTCAACCGC AACACCGTCC AGAAAGACCT ACAACGGGTA TTCGGGACAG GATTGTTTGA AGATGTCAAC GTTTCCCTTG ACCCCGGTAC AGACCCCACC AAGGTGAATG TGGTGGTAAA TGTGGTAGAA CGTAGCAGTG GTTCAATTGC TGCTGGTGCT GGTATCAGTT CTTCTAGTGG GTTGTTTGGT ACAGTCAGCT ATCAACAGCA AAACCTTAAC GGCAGAAACC AAAAACTAGG CGCAGAAGTA CAACTTGGCG AACGAGAATT GTTGTTTGAC CTCCGGTTCA CAGACCCTTG GATTGGTGGT GATCCTTACC GTACCTCTTA CACAGCGAAT ATTTTCCGCC GTCGTTCCAT CTCCTTGATT TTCGACGGGA AGGACGAAGA TATTAGAACA TTTGACCCTG GTAATCCTAA TGATACAAAC GAGCAAGACC GTCCTCGTGT CACTCGTCTA GGTGGTGGTG TTACCTTCAC CCGCCCTCTA TCAGCTAATC CCTTTGAAAG AGCAGAATGG ACAGCCTCAG CAGGCTTGCA GTATCAGCGA GTTAGTACCC GTGATGCTGA TGGCAACTTG AGAAAAGAAG GTGCTGTATT CGACGATAAT GGCAACCGTA CCAGTGAACT CGTTCCCCTC AGCTTTTCTG GGACGGGAGA AGATGACTTA TTATTAGTGC AACTAGGCGC ACAGCGTGAC CTCCGCAACA ATCCCTTGCA GCCCACTAGC GGTTCTTTCT TACGTTTCGG CGTAGATCAA TCAGTACCAG TAGGCTCAGG TAATATTTTC CTCACTCGGT TCCGGGGTAG CTATAGTCAA TATCTCCCCG TTAAATTTAC AGGTTTTAGT AAGGGGCCGG AAACTATAGC CTTTAACATC CAAGGCGGCA CAGTCCTTGG TGATTTGCCC CCCTATGAAG CTTTTACCCT TGGTGGTAGT AACTCAGTAC GTGGTTATGA AGAAGGTGCT TTAGGTAGCG GACGCAGCTT TGTGCAAGCA TCTGTTGAGT ATCGTTTTCC TGTTTTCTCT GTAGTTAGTG GCGCTTTATT TTTTGACGTT GGTAGCGACT TGGGAACCAG TACCAGAACT GCTGAAGTGC TGAATAAAAG CGGTAGCGGC TACGGTTATG GTCTTGGTGT GCGCGTGCAA TCACCATTGG GGCCAATTCG TATTGACTAT GGTATCAACG ATGACGGTGA TAGCCGCATC AATTTCGGTA TTGGCGAAAG GTTTTAG
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Protein sequence | MRLSPVLVAA VAITAPLSSS LTANAQTPTN SEQTLEAIAP ATNQQSEQNV SLESPEDFTT VKALADMQSP SGELSTDKST KSAATTKKDV IVPTVETLVA TNPPMQESNS ASKIAPVEIG KPTSSAVFRS QYQTINYGNY GRSLTSGVSS SPSPQKKANL PSPVPNPLDT GATTAKQLVQ APEQPAPQPE VAPPSTEEPA PAPETTPGTE NFNTPNATPE TTEPRVLVSE VLVRPQSGQL TPELEAQVYN VIRTQPGRTT TRSQLQEDIN AIFGTGFFSN VQASPEDTPL GVRVSFIVQP NPVLSKVEIQ ANPGTNVPSV LPQATADEIF RPQYGKILNL RDLQEGIKEL TKRYQDQGYV LANVVGAPQV SENGVVTLQV AEGVVENISV RFRNKEGQDV NEQGQPIRGR TQDYIITREV ELKPGQVFNR NTVQKDLQRV FGTGLFEDVN VSLDPGTDPT KVNVVVNVVE RSSGSIAAGA GISSSSGLFG TVSYQQQNLN GRNQKLGAEV QLGERELLFD LRFTDPWIGG DPYRTSYTAN IFRRRSISLI FDGKDEDIRT FDPGNPNDTN EQDRPRVTRL GGGVTFTRPL SANPFERAEW TASAGLQYQR VSTRDADGNL RKEGAVFDDN GNRTSELVPL SFSGTGEDDL LLVQLGAQRD LRNNPLQPTS GSFLRFGVDQ SVPVGSGNIF LTRFRGSYSQ YLPVKFTGFS KGPETIAFNI QGGTVLGDLP PYEAFTLGGS NSVRGYEEGA LGSGRSFVQA SVEYRFPVFS VVSGALFFDV GSDLGTSTRT AEVLNKSGSG YGYGLGVRVQ SPLGPIRIDY GINDDGDSRI NFGIGERF
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