Gene Ava_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0084 
Symbol 
ID3683437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp112628 
End bp114013 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content40% 
IMG OID637715411 
ProductSerine/threonine protein kinase 
Protein accessionYP_320605 
Protein GI75906309 
COG category[L] Replication, recombination and repair
[K] Transcription
[T] Signal transduction mechanisms
[R] General function prediction only 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00298009 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0808498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGGCA CTTTACTAGT CGGTCGTTAT CAAATCCGCC AAATGTTAGG CGGAGGTGGA 
TTTGGTAAAA CTTATATCGC ACTTGACACT CAACGCCCTG GTCAACCTAA ATGTGTCGTC
AAGCACTTTC AACCTGTAAC CCATAACCCA GAGTTTATGG AAACGGCCAG ACGGCTGTTC
ACTAGCGAAG CAGAAACACT AGAAAGACTG GGGTATCATG ATCAAATTCC TCGTCTTTTA
GCATACTTTG AAGAGCATCA AGAATTTTTT TTGGTACAAG AATTTATTGA CGGGCATTCA
CTAAAAGCAG AAATGCCACC TAATCAACCT TGGACGGAAA AAAAAGTCAT AGCACTTCTA
CAGCAGGCCC TAGATATCTT GCAATTCATT CATCTTCATA AAGTAATTCA TCGAGATATC
AAGCCGGAAA ATATGCTCAG AAGGCTACAT GATGGTAAGT TAGTGCTGAT AGATTTTGGA
GCAGTTAAAG AAGTCCAAAC ACAGATCAGC GCAATTAGTG GGCAAACCGA AATGACTGTT
GCTATAGGTA CACCAGGATA TATGTCTTTA GAACAGTTCC GAGGTAAACC CCGTCTCAAC
AGTGATATTT ATTCTCTAGG TATAGTTTGT ATTCAGGCAT TAACAGGAGT ACATCCCAGA
GAACTAGCAG AAGATCCCGT ATCAGGAGAA ATTCTCTGGC AAAATAGTGC AGAAGTTAGT
CCTATGTTAG CTTCTGTGTT ATCTAAAATG GTACTAAATA ACTTTAAACT CCGCTACCAA
TCGGCTACAG AAGTTTTAGA GGCGCTACAA CAGAATTTTC ATCTTCAAGC AGAAACTCAA
ATAACTGTTG CACCATCAAC ATTGACACAA CAGCCTCAGC TTAGTCTATC CCAACAGCAA
AGATTAGGGT TACATAGCAG CAATAGTTCT ATTCTTTCCG TAGAACAGTA TAACTATCTA
GAAAATGTAC TCACAACTTT CGTTGGTCCC ATAGCAGCAA CGTTATTACG AAGAACAGCA
TCAGCTTCTA GTTATCAAGA ATTGATTGAT AGTTTGGCTT TACATTTAAC AGCCAATCAA
CAAACTGAGT TTAAGAAGAA AGTAGAACCG CTCCTTGAGC AACCGACCAT TAAGTACGAA
AATACCTCTA AGAGTGTACC AGAAAAAACC CAACCAACTA CAAACTCTGG TATTAATGAT
ACTTTGATCC GTGAGTGTGA ACGGGAGTTA CTAGACTTAA TTGGCCCAAT TGCTGTTTTC
CTCATTCAAA AAGCAAAAAA ATCTACCAGT GCAACAACCT CCCGTGCCGA ATTTATTAAA
ATTATATCGG ATGAAATTCC TGATGCTCAA AAAGCTTGGC AATTCCAGCA GCGATTACTT
CCTTAA
 
Protein sequence
MLGTLLVGRY QIRQMLGGGG FGKTYIALDT QRPGQPKCVV KHFQPVTHNP EFMETARRLF 
TSEAETLERL GYHDQIPRLL AYFEEHQEFF LVQEFIDGHS LKAEMPPNQP WTEKKVIALL
QQALDILQFI HLHKVIHRDI KPENMLRRLH DGKLVLIDFG AVKEVQTQIS AISGQTEMTV
AIGTPGYMSL EQFRGKPRLN SDIYSLGIVC IQALTGVHPR ELAEDPVSGE ILWQNSAEVS
PMLASVLSKM VLNNFKLRYQ SATEVLEALQ QNFHLQAETQ ITVAPSTLTQ QPQLSLSQQQ
RLGLHSSNSS ILSVEQYNYL ENVLTTFVGP IAATLLRRTA SASSYQELID SLALHLTANQ
QTEFKKKVEP LLEQPTIKYE NTSKSVPEKT QPTTNSGIND TLIRECEREL LDLIGPIAVF
LIQKAKKSTS ATTSRAEFIK IISDEIPDAQ KAWQFQQRLL P