Gene Ava_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0082 
Symbol 
ID3683435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp104299 
End bp106608 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content40% 
IMG OID637715409 
Producthypothetical protein 
Protein accessionYP_320603 
Protein GI75906307 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00502388 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00904 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAAAA CTTTTCAACC CAAAAAAATC GCTATCTTAG GCGGTGGAAT GGCATCTCTA 
ACCACCGCCT ACGAATTAAC CAGTCAACCA GGCTGGGAAA GTCTTTACGA TATTACTATT
TATCAAACCG GGTGGCGTTT GGGCGGTAAA TGTGCAACTG GACGCAATAT CAAACCCCAT
ACAGCTGATT GTGAACCAGA CTACCGGATC GAAGAACACG GACTACACAT TTTTTTTGGA
TTCTATGAAA ATGCCTTTCG TCTATTAAAG CAATGTTACG ACGAACTTGG TGGTAACGGG
CCTTTTCACA CCATAAAAGA TGCCTTCAAA CCCCACAGTC TAATTGTTTT AGAAGAGTAC
ATTAATCAAA AATGGGTAAG CATACCTTTT GATTTTCCGA CTAACTGTCT CGTTCCTTGG
GAAGGTGACG GTATTTCCTC TCTCTGGGAA CATATCTGCA CCACTATCAA ATTCATCATT
CAGACTTATG CAGAAATTGA TAATTACAAC CAGTCTGATT CATCTCCAAG TTCCTCAGCA
TCTCTTGCTA AACAAATAGC ATTGGGCAAG GAGGTCATAG AATTTTTAAC AGATAGTAGT
CTTTTGCAGT TCCCTAGCCA ATTGATTCCG TTATTTCTCC AAGCACCCAG CTTTTGGGGA
GGGTGGCTGA AAAATATTAA CCAATATATT ATCGATATCC TTCAAGGCCT AGATTTAACT
TCCGAAACAG TTTTTTTAAA CCTCGTCGAT AATCTAGTGC AATCACTGCC TAAAAATACC
AAAACTCACA GACGCGAACA TCATACGTTA ATTCTCCGGT TAGTAGAACG CTTTCAAAAA
CACTTGAGCC GTCAGATAGA ATCTAAAATT AGTCAAAATC CTGACATATT CTGGCGGTTA
ACACTCATCG ACTTAGCATT AGCCAACATC CGAGGCTTAT TTGTAGATGA GGTCATAAAT
TTCCGCTCTC TAGAAAGTCT AGATGAGTAT AACTACAGAG ATTGGCTACA AAAAAACGGA
GCGAGGAAAT CCAGTGTTAA ATCAGCATTT ATTCGCGTCC TATACGATTT AGTCTATGGC
TTTCCCGAAG GCAACACTAA TAAACCACAA CTAGCAGCAG GAACAGCAAT CCGTATCCTC
ACCACTATCT TGTTCAAATA TAATGGTGCA ATCATGTGGA AGATGCAATC AGGAATGGCA
GATGTAGTCA TCACACCACT ATATGAGCTA CTAAAGCGTC GCGGCGTAAA ATTCCAGTTC
TTCCATATTG TCAAACAGTT GCATCTAGAT GAAAATCAGC AATCGATTGC TAGCATTACT
TTAGCTCGTC AAGTTAATTT AAAAAAACCA GAGCAAGAAT ATCAACCACT TATCACAGTT
AAAGATATTC GTTGCTGGCC TAGCGAACCT CTTTATGATC AAATTGTCGA TGAAGAAGCA
CAAAAACTCC AACAACAAAA AATTAACCTT GAATCACATT GGACACCTTG GCAAAATGTG
GACAAAATTA CTCTTACCAA AGGTGATGAT TTCGATATTG TGTTGCTAGG AATTTCTATA
GCCGCCTTAC CTTTTATTTG TGGTGAATTG CTCCAAGCTG AAAAAAATCC AGTTCATCAA
AAATGGCTCA ATATGCTCAG TAACGTGAAG ACAGTCACCA CTCAAGGTGG ACAAATATGG
CTCAAGCCTA CCTTGTCCCA ATTGGGATGG CAAAAACCTA GTCCGGTGTT AGGAGCTTAT
GTTGAACCGC TTGATGTCTA TGCAGATATG AGCGAGGTAT TACCAAGAGA AAATTGGCCT
TCTGACCATT ACCCTTATAA TGTAGCTTAT TTTACAGGAG TAATCGCAGA TCCTGGGATT
CCTCCCCAGA CAGAATATGA TTTTCCAGCT AAAGCCCAGA AAACAGTAGA GCAACAAGCA
ATTAACTTTC TTAACAATCA CATCGGACAC CTTTGGCCTA ATGCTACTCA CCCCAAAAAT
CCCCAAGGTT TGAATTGGGA TTTACTAGTA GATTTTCAAA ACCGTCAGGG CGCAGAACGT
TTTCAAGCTC AATACTGGCG GATTAACATT GACCCGTCAG AACGCTATGT ATTATCTGTA
CCTGGAAGTA CTAAGTATCG ACTCAAAACC GATGAGTCTG GTTTTGATAA CCTCTACCTC
ACTGGTGACT GGATTAACAA CGGTTACAAT TCCGGTTGTG TAGAAGCAAC AGTCATGTCT
GCAATGCAAG CTACGCGTGC TATTTTACAA CAATGCTTCC ACATAAATTA CACCAAAAAA
ATTATTGGTG AATGGGATTC TTGGCTCTAA
 
Protein sequence
MSKTFQPKKI AILGGGMASL TTAYELTSQP GWESLYDITI YQTGWRLGGK CATGRNIKPH 
TADCEPDYRI EEHGLHIFFG FYENAFRLLK QCYDELGGNG PFHTIKDAFK PHSLIVLEEY
INQKWVSIPF DFPTNCLVPW EGDGISSLWE HICTTIKFII QTYAEIDNYN QSDSSPSSSA
SLAKQIALGK EVIEFLTDSS LLQFPSQLIP LFLQAPSFWG GWLKNINQYI IDILQGLDLT
SETVFLNLVD NLVQSLPKNT KTHRREHHTL ILRLVERFQK HLSRQIESKI SQNPDIFWRL
TLIDLALANI RGLFVDEVIN FRSLESLDEY NYRDWLQKNG ARKSSVKSAF IRVLYDLVYG
FPEGNTNKPQ LAAGTAIRIL TTILFKYNGA IMWKMQSGMA DVVITPLYEL LKRRGVKFQF
FHIVKQLHLD ENQQSIASIT LARQVNLKKP EQEYQPLITV KDIRCWPSEP LYDQIVDEEA
QKLQQQKINL ESHWTPWQNV DKITLTKGDD FDIVLLGISI AALPFICGEL LQAEKNPVHQ
KWLNMLSNVK TVTTQGGQIW LKPTLSQLGW QKPSPVLGAY VEPLDVYADM SEVLPRENWP
SDHYPYNVAY FTGVIADPGI PPQTEYDFPA KAQKTVEQQA INFLNNHIGH LWPNATHPKN
PQGLNWDLLV DFQNRQGAER FQAQYWRINI DPSERYVLSV PGSTKYRLKT DESGFDNLYL
TGDWINNGYN SGCVEATVMS AMQATRAILQ QCFHINYTKK IIGEWDSWL