Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0081 |
Symbol | |
ID | 3683434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 102908 |
End bp | 104155 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637715408 |
Product | hypothetical protein |
Protein accession | YP_320602 |
Protein GI | 75906306 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.203435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0152048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTGA ATAATCCTTT GGAGATGATG CAAACAAGTT TCCATACAGC TTTAGGCGCT GTTAGTGAAT TGACATCTCT CCTGCAAGAA CCCCAAAAAC TGCCAAATTA CTTTACTCAA ATCCAACAAA AACCAGAGCA ATTATTTCAA GATTTAGCGG TAAAAGGCAA AAATATAGAA CAAGATGCAG CGAGTTTTTT CCAAAATTAC TTTTGTGGCA AGGGAAACAA ATCACCATAC CCCAAATATA TAGAACGAGC GGATGGACAG GCATTTAATC AACCCTACGA AATCAAGGGA ACAAAAATGT ATGCCTTTGT CGTTGAAGGC TCGATGGCAA AGTTGCAAGA GGTGTGTGAT AAATATCTCA ATGATCCCAA TAATGGAGAG ATTGAATATC GCCCAGCGAT GAACTATCTC ATCCTGACAT TCAACAAGAT AGATTCTTTA AGTTCCATCA ATCCACCAGA CTATGATAAA GGAACCGTAT TTGAAGAAGA AGCCATTTTC TGGATGTTAA CGGTGGTGGG TAAAAGAGTC GGCCCTTTAT TTATAGCCGA ACGCCTGGCT TGGTTTATGC CTTACCTATA TGTGAATAAT TCTCCTATCC TGGTTTCTGG TAGGGAAGTC TACGGCTTCT TTAAACAACT TGGTACATTT CAGATTCCCG ACTTAAATCA AGAACCAGAT TTATTGACCG TAGACACCTT AGTATTTAAA GACTTTTCAC CTACAAGCAA ATCTATAGAT GCTCGCCTGT TGGAAGTTAA ACGCGTTAGT ACAGGAGAGA AACATGAAGC TATCAAAACA TGGGACACCT TTGAAGAAGC AGTGAGGGCG ATCGCTAGTT TACTATTTGA CAATGACGAA ATTATCTTTC CTGGCTTACA GTTACCCTTC AATCTCCTCG AATATCTCCT CGCAAAAATC GTCCCCCTTG TCACTCTCAA ACAAATCCGC GACGTAGAAA ATAGTAAAAA AGCCTGCTAT CAAGCACTCA TCGAATCGCC AATGCAACTC CAAACTTTCC ATGGCGGAAA ACTCTTTGGC TTCAATAATT TTGGCGACCA GTTTCAATTA AAAATCAATA ATTTCGCTAG CCAACCAATT GTCCAGGATT TGGGGCTATA CAAAGGTTAT TCTCCAGGTA GTGAATCCAT AAATATTCCC GTCAAGCTTG GTTTTGTCCT GAATTTCGAC TTCACCCTCA AAGATGGTAA AACCGTTTGG CAAGCACCAC AGCAATAG
|
Protein sequence | MNLNNPLEMM QTSFHTALGA VSELTSLLQE PQKLPNYFTQ IQQKPEQLFQ DLAVKGKNIE QDAASFFQNY FCGKGNKSPY PKYIERADGQ AFNQPYEIKG TKMYAFVVEG SMAKLQEVCD KYLNDPNNGE IEYRPAMNYL ILTFNKIDSL SSINPPDYDK GTVFEEEAIF WMLTVVGKRV GPLFIAERLA WFMPYLYVNN SPILVSGREV YGFFKQLGTF QIPDLNQEPD LLTVDTLVFK DFSPTSKSID ARLLEVKRVS TGEKHEAIKT WDTFEEAVRA IASLLFDNDE IIFPGLQLPF NLLEYLLAKI VPLVTLKQIR DVENSKKACY QALIESPMQL QTFHGGKLFG FNNFGDQFQL KINNFASQPI VQDLGLYKGY SPGSESINIP VKLGFVLNFD FTLKDGKTVW QAPQQ
|
| |