Gene Ava_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0075 
Symbol 
ID3683487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp98163 
End bp98609 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content40% 
IMG OID637715402 
Productgas vesicle protein GVPa 
Protein accessionYP_320596 
Protein GI75906300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0645865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000500428 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACTACTA CCCCAATACA CCCAACACGT CCTCCGACTA ACTCAAATCG AGTAATTCCC 
ACTTCTACAC AAGGTTCCAC CTTAGCAGAT ATTCTCGAAA GAGTTTTGGA TAAAGGCATT
GTGATTGCTG GTGATATTTC CGTATCTATC GCCTCAACTG AACTCATACA TATTAGGATT
CGTCTGTTAA TTTCTTCAGT TGATAAAGCC CGTGAAATGG GTATCAATTG GTGGGAAAAT
GACCCCTATC TTAGTAGCAA ATCGCAACGT TTAGTTGAAG AAAATCAACA ACTACAACAA
CGGCTAGAAA GTCTAGAAAC ACAACTACGT TTACTCACAT CTGCCGTGAA AGAAGAGAAT
AGATTAACAG TTAACTATCC AGAAAATGTG CAACCAATGT ATGAAGTAAA TAGTCAAGAG
GGAGATGACT CCCAACTTGA GGCTTAG
 
Protein sequence
MTTTPIHPTR PPTNSNRVIP TSTQGSTLAD ILERVLDKGI VIAGDISVSI ASTELIHIRI 
RLLISSVDKA REMGINWWEN DPYLSSKSQR LVEENQQLQQ RLESLETQLR LLTSAVKEEN
RLTVNYPENV QPMYEVNSQE GDDSQLEA