Gene Ava_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0065 
Symbol 
ID3683477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp86470 
End bp87060 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content33% 
IMG OID637715392 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_320586 
Protein GI75906290 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.670969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0252366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA TTTTAGTAAT TGAAGACCAA GAAGAAATTC GTAGCATTAT TGTAGAAATG 
CTAACTGCGG AAAATTTCTA TGTTATGGAC GCAGAAAACG GACAAGTCGG GATTACATTG
CTACAGACAG AAATTCCCGA TTTGATTATC TGTGATATTG CTATGCCAAA AATAGATGGA
TACGAAGTTG TTACTTGGTC ACGGGAAAAT CCAGAGACTG AAGCCATTCC TTTTATATTT
CTTACAGCTA AAGCTTCTCA AAATGATATT CGTCAAGGTA TAGAATTAGG TGCAGATGAT
TATCTGGTAA AGCCATTTAC AAGAGCCGAA TTACTGGGAG CAATAACAGC TAGATTAGAG
AAACAAGAAA TAATTAATAG ACAAACACAA CAAAGACTCC ATAAATCTTA TATTTATCTG
ACATCGACAA TTAGAAATGA GGTAAATAAT CCTCTTAATT ACATTACATC GATATCAGAG
AAGCTCATCA ATGACTATGA ATTTATGAAT CGGGAGGAAA TCTTAAAAAA GATCAAAGAA
ATTTATAATT TAAGCAAAAA TTTTCAGGAT GGAAACCTGA ACAAGCTATA A
 
Protein sequence
MTKILVIEDQ EEIRSIIVEM LTAENFYVMD AENGQVGITL LQTEIPDLII CDIAMPKIDG 
YEVVTWSREN PETEAIPFIF LTAKASQNDI RQGIELGADD YLVKPFTRAE LLGAITARLE
KQEIINRQTQ QRLHKSYIYL TSTIRNEVNN PLNYITSISE KLINDYEFMN REEILKKIKE
IYNLSKNFQD GNLNKL