| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0055 |
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| Symbol | |
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| ID | 3683564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 67154 |
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| End bp | 68929 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637715382 |
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| Product | PAS/PAC sensor Signal transduction histidine kinase |
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| Protein accession | YP_320576 |
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| Protein GI | 75906280 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.291296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCTG AATTTCAGCA TCAAGAATTG CAGTCTTGTT GCCAGCAGGG CGATCGCCTA
ATGGTAGATT TACAAAAGAC ACAACAGGAA CTTAAAGAAA CCCAGGGTAA ATTATCGCTA
AAAAAATCTC TCAAAGAAAT AGCAGATATC AAATTTGCCT TAGACCAATC GTCTATTGTT
GCTGTAACAA ATCATCAAGG AATTATTGAA TATGTAAATG ATAAGTTTTG TCAAATATCT
CAATATCAGC CAGAAGAGTT AATTGGCAAA ACTCATAGAA TTATCAATTC TGGGTATCAC
TCCCCAGAAT TTTTCCAACA AATGTGGTTA ACTATCAGCC AAGGAAGAGT TTGGAAAGGC
GAAGTTAAAA ACTTGGCGAA AGATGGCACA TATTATTGGG TAGATACAAC TATTGTCCCC
TTGTTAGATG AGCAGGGCAA ACCTCAGCAA TATGTGGCTA TTCGCAATGA TATTACTGCT
CGCAAACAAG CAGAAATAAC TTTAAAACAA TCCCTTAAAG AAATAGCAGA TATCAAATTT
GCCCTAGACC AGTCGTCTAT TGTTGCTGTA ACAAATCATC AAGGAATTAT TGAATATGTA
AATGATAAGT TTTGCCAAAT ATCTCAATAT CAGCCAGAAG AACTAATTGG GAAAACTCAT
AGAATCATCA ATTCTGGATA TCACTCCCCA GAATTTTTCC AACAAATGTG GTTAACTATC
AGCCAAGGAA GAGTGTGGAA AGGTGAAGTT AAAAATCTGG CGAAAGATGG CACACATTAT
TGGGTAGATA CAACTATTGT CCCCTTGTTA GATGAGCAAG GCAAACCTCA ACAATATGTG
GCTATTCGCA ATGATATTAC TGCTCGCAAA CAAGCAGAAG CCGAACTCAG CAAGCAAGCG
AAGGAACTTG AACAAGCGTT AAAACAACTA CAACTTACCC AACTGCAACT TATTCAAAGT
GAAAAAATGT CTTCTCTAGG TCAATTAGTA GCAGGTGTGG CTCACGAAAT AAATAATCCA
GTGAACTTTA TTTCCGCTAA TCTCAAACAC GCTTGCCAAT ATACTCAAAA CCTATTGAAA
ATGATTCATC TTTATCAAAA TTACTACCCA GAACCAGCCT TAGAGATTGC AGAAGAAGCT
GAACATCTCG ACCTAGAATT TTTACTCGCA GACTTGCCAA AACTTTACTC TTCGATGACA
CTGGGAGCAG CCCGCATCAG CAAGATTGTT ACTTCTCTAC GTACATTTTC GCGTCTTGAT
GAATCTGATT TAAAAGCTGG TGATATACAT GAAGGTATTG ATAGTACATT AATGATTTTA
GAACACCGTC TGAAATCCCA GCAAAATCGA CCTGATATTT TAGTTATAAG AGAATATGGT
AATTTGCCTT TAGTTGAATG CTATGCTGCC CAACTCAACC AAGCATTAAT GAATATTTTA
ATCAATGCTA TTGATGCTTT AGAAGAAAAA TATGAACAAG AAAACTATCA GCAGGTGACA
CCTACTATCC ATATCTGTAC AGAGATATCA AGTTATAAAC AAATAACTAT CCGCATAAAA
GATAATGGTG TAGGTATGTC AGATGAAGTA AGACAAAAAA TATTTGACCC TTTCTATACG
AGTAAACCTG TAGGTAAAGG AACTGGTATG GGTTTGTCTA TCAGTTACCA AATTATTACT
AATAGACATG GTGGGTCTTT AGAATGTATT TCTTCTCTGG GAAAAGGCGC AGAATTTATA
ATTGCAATTC CCATTCACCT GATGAAAAAT ACATAG
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| Protein sequence | MFPEFQHQEL QSCCQQGDRL MVDLQKTQQE LKETQGKLSL KKSLKEIADI KFALDQSSIV
AVTNHQGIIE YVNDKFCQIS QYQPEELIGK THRIINSGYH SPEFFQQMWL TISQGRVWKG
EVKNLAKDGT YYWVDTTIVP LLDEQGKPQQ YVAIRNDITA RKQAEITLKQ SLKEIADIKF
ALDQSSIVAV TNHQGIIEYV NDKFCQISQY QPEELIGKTH RIINSGYHSP EFFQQMWLTI
SQGRVWKGEV KNLAKDGTHY WVDTTIVPLL DEQGKPQQYV AIRNDITARK QAEAELSKQA
KELEQALKQL QLTQLQLIQS EKMSSLGQLV AGVAHEINNP VNFISANLKH ACQYTQNLLK
MIHLYQNYYP EPALEIAEEA EHLDLEFLLA DLPKLYSSMT LGAARISKIV TSLRTFSRLD
ESDLKAGDIH EGIDSTLMIL EHRLKSQQNR PDILVIREYG NLPLVECYAA QLNQALMNIL
INAIDALEEK YEQENYQQVT PTIHICTEIS SYKQITIRIK DNGVGMSDEV RQKIFDPFYT
SKPVGKGTGM GLSISYQIIT NRHGGSLECI SSLGKGAEFI IAIPIHLMKN T
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