Gene Ava_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0048 
Symbol 
ID3683557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp54333 
End bp55160 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content39% 
IMG OID637715375 
Productphosphate ABC transporter ATP-binding protein 
Protein accessionYP_320569 
Protein GI75906273 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.240899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.357685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACA ACAGTAGAAA TCAACGAGAT AGTGCCACAA TCAATCACAA GAATCAAGCT 
GTATTTAATG TTGAAGGTGT CAAGGTCTAT TATGGTGGAT TTTTAGCACT AATTGATGTA
CATTTGCAAA TACCAGATAA GGAAATTATT GCGTTTATTG GACCTTCTGG ATGTGGTAAA
AGTACATTAT TACGCTGCTT TAATCGCATG AATGATTTAA TCCCCGGAGC CAAGGTAGAA
GGGAGATTAC ATTACCGCGA TCGCAACATT TATGACTCCA GAATTAATTC TGTAAAATTG
CGCCGTCAAG TAGGAATGGT GTTTCAAAGA CCTAACCCCT TTCCTAAATC TATATATGAA
AATATTGCTT TTAGCCCTCG TGCTAATGGC TATAAAGGGA ATCTGGATGA ATTAGTAGAA
GATTCTCTCA GACGTGCTGC TATCTGGAAT GAAGTCAAAG ACAAACTCAA AGCCAAAGGT
ACGGCTTTAT CTGGTGGACA ACAGCAACGG CTGTGTATTG CCAGAGCGAT CGCCATGAAG
CCCGATGTAT TATTAATGGA TGAACCATGC TCTGCTCTTG ACCCTATTTC TACACGTCAA
GTAGAAGAAC TTTGCTTAGA ACTGAAGGAG CAATACACCA TAATTATGGT GACTCATAAT
ATGCAGCAGG CTTCTAGAGT AGCAGATTGG ACAGCATTTT TTAATACAGA AATTGATGAA
TATGGTAAGC GTCGGGGTAA ATTAGTAGAA TTTAGTCCTA CAGAACAAAT GTTCAATTCT
CCCAATACTA AAGAAGCACA AGAATATATC AGTGGACGCT TTGGGTAA
 
Protein sequence
MSYNSRNQRD SATINHKNQA VFNVEGVKVY YGGFLALIDV HLQIPDKEII AFIGPSGCGK 
STLLRCFNRM NDLIPGAKVE GRLHYRDRNI YDSRINSVKL RRQVGMVFQR PNPFPKSIYE
NIAFSPRANG YKGNLDELVE DSLRRAAIWN EVKDKLKAKG TALSGGQQQR LCIARAIAMK
PDVLLMDEPC SALDPISTRQ VEELCLELKE QYTIIMVTHN MQQASRVADW TAFFNTEIDE
YGKRRGKLVE FSPTEQMFNS PNTKEAQEYI SGRFG