Gene Ava_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0046 
Symbol 
ID3683555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp52424 
End bp53365 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content39% 
IMG OID637715373 
Productphosphate ABC transporter permease 
Protein accessionYP_320567 
Protein GI75906271 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.640676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATA ACACTTTTCA CGATGATCCT TATTTACTAT CTAGACAATC ACTAGATAAA 
AATATATCTG AAGATATAAT AGAAAGGATT GTGGGAGCAA TTTTATTTGC TTGTGCTTTA
GTTTCCGTGT TGACGACATT TGGTATTGTC TTAATTATCT TTCAGGAAAC ATTTAGTTTT
TTCCAAGAAG TTTCCTTTGC CCAATTCTTT CTCGATACTA AATGGACACC TCTGTTTGCG
GAGAGACATT TTGGTGTTTG GCCTTTAATT AATGGCACTT TCTTGACTAC AGCTATTGCT
ATGTCGGTGG CGATTCCTTT GGGTTTATCT TCTGCCATTT ACTTGAGTGA ATATGCTCAA
CCCAAAGTAG CAGCAGTTTT ACGCCCTGCG GTGGAACTTT TAGCGGGTGT GCCAACGGTA
GTATATGGCT ACTTTGCGCT ATTGTTTCTC ACGCCATTAC TACGATATTT GATTCCTTTG
GAAATATTCA ACGCCTTGAG TGCAGGATTG ATGATGGGAG TAATGATTAC TCCTACCGTT
GGTTCTATTA GTTTGGATGC TATTCGCTCA GTTCCACGTT CTTTGCGGGA AGGAGCTTAT
GCTTTGGGTA TTACTAAATT GGAAACCATT TTTAAAGTAG TCTTACCAGC AGCACTTTCG
GGAATTGTTG CCTCAATTAT TTTAGGTATT TCTCGCGCCG TAGGTGAAAC AATGACTGTA
CTCATTGCTG CTGGACTACA GCCAAAACTG ACTATTAGCT TTGCAGAGTC AATAGCAACC
ATGACAGCTT ACATGGCACA AATCTCTGGA GGAGATAGCC CGCGTGGAAG CCTTAATTTC
AAGACTTTAT ATGCTGTGGG GGCAGTTTTG TTTGTTCTTA CCCTATCCTT AAATATTGTT
AGTTACTGGA TTGCTAATCG TTATAAAGAA AAGTACGAGT AA
 
Protein sequence
MQNNTFHDDP YLLSRQSLDK NISEDIIERI VGAILFACAL VSVLTTFGIV LIIFQETFSF 
FQEVSFAQFF LDTKWTPLFA ERHFGVWPLI NGTFLTTAIA MSVAIPLGLS SAIYLSEYAQ
PKVAAVLRPA VELLAGVPTV VYGYFALLFL TPLLRYLIPL EIFNALSAGL MMGVMITPTV
GSISLDAIRS VPRSLREGAY ALGITKLETI FKVVLPAALS GIVASIILGI SRAVGETMTV
LIAAGLQPKL TISFAESIAT MTAYMAQISG GDSPRGSLNF KTLYAVGAVL FVLTLSLNIV
SYWIANRYKE KYE