| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0023 |
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| Symbol | |
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| ID | 3678868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 20934 |
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| End bp | 22625 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637715350 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_320544 |
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| Protein GI | 75906248 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.393007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAGA ATCTTAGAAG CAAGGCTATC ACACAAGGGG TGCAGCGATC GCCTAACAGA
GCAATGCTGC GGGCTGTTGG TTTTCAGGAT GCAGATTTTA CCAAAGCCAT TGTCGGTGTT
GCCAATGGTT ACAGCACTAT TACCCCGTGT AATATGGGGA TAAATCAACT AGCACAAAGG
GCAGAAGCTG GTATAAATCG CGCTGGAGCG AAGCCACAAA TATTCGGTAC AATTACGATT
AGTGATGGGA TTTCGATGGG AACCGAAGGG ATGAAATATT CCCTGGTATC ACGAGAGGTA
ATTGCTGACT CCATTGAAAC CGTTTGTAAT GGGCAAAGTT TAGATGGGGT AATTGCCATT
GGTGGCTGTG ATAAAAATAT GCCAGGGGCA ATGATAGCGA TCGCTCGGAT GAACATCCCT
GCTATCTTTG TTTACGGTGG CACAATTAAA CCCGGACACT ACAACGGCAA AGATTTAACT
GTTGTTAGTT CTTTTGAAGC TGTCGGTGAG TACAGCGCTG GCAAAATCGA CGAAAATGAA
CTGTTAGCAG TAGAACGCAA TGCTTGTCCT GGTGCAGGTT CCTGCGGTGG GATGTACACA
GCAAATACTA TGTCCTCTGC TTTTGAAGCA CTGGGAATGA GTTTGCCCTA TTCGTCTACA
ATGGCAGCAG AAGACGACGA AAAAGCTGAT AGTACGGAAG AATCAGCCAA GGTATTAGTA
GAAGCAATTC GTCATCAGCT ATTACCCAGG CAGATTATCA CTCGTAAATC CATAGAGAAT
GCCATAGCAG TAATTATGGC GGTGGGAGGT TCCACCAATG CCGTGTTACA TTTTCTAGCG
ATCGCCCGTG CAGCTGGTGT AGAGTTAAAT CTAGACGACT TTGAAACTAT TCGTGGTCGT
GTCCCCGTTT TGTGCGACTT GAAACCAAGC GGTAGATATG TAGCTACAGA CCTGCACAAA
GCTGGTGGTA TACCCCAAGT CATGAAAATG TTACTTGTGC ATGGTTTACT CCACGGCGAC
TGTATAACCA TCACAGGTAA AACCATTGCC GAAGTTTTAG CAGATATCCC AGAAGAACCA
TCGCCTAATC AAGACGTGAT TCGTCCTTGG AATAAACCCA TGTATGCCCA AGGTCACTTG
GCTATACTCA AAGGTAATTT GGCTACAGAA GGCGCAGTCG CCAAAATTAC AGGTGTGAAA
AATCCTGTGA TTACCGGGCC AGCCAAAGTA TTTGAATCAG AAGAAGATTG TTTAGATGCA
ATTTTGGCAG GTAAGATTAA AGCCGGAGAC GTGATTGTCG TCCGTTACGA AGGCCCCAAA
GGCGGCCCTG GGATGCGAGA AATGTTAGCC CCCACCTCAG CTATTATCGG TGCAGGTTTA
GGTGATTCAG TGGGATTAAT TACCGATGGA CGCTTCTCCG GTGGTACTTA TGGGATGGTA
GTCGGACACG TTGCACCAGA AGCAGCCGTT GGTGGAGCGA TCGCACTGGT ACAAGAAGGT
GATAGCATCA CAATTGATGC CCATACCCGT TCTTTGCAGT TGAACATATC AGACGAAGAA
TTAGCCCATC GTCGTGCCAA CTGGCAACCC CGTCCCCCAC GTTACACTAA AGGCATACTC
GCAAAATACG CCAAGTTAGT AGCTTCTAGT AGTGTAGGTG CGGTCACCGA TTTAGACTTA
TTTAATGAAT AG
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| Protein sequence | MSENLRSKAI TQGVQRSPNR AMLRAVGFQD ADFTKAIVGV ANGYSTITPC NMGINQLAQR
AEAGINRAGA KPQIFGTITI SDGISMGTEG MKYSLVSREV IADSIETVCN GQSLDGVIAI
GGCDKNMPGA MIAIARMNIP AIFVYGGTIK PGHYNGKDLT VVSSFEAVGE YSAGKIDENE
LLAVERNACP GAGSCGGMYT ANTMSSAFEA LGMSLPYSST MAAEDDEKAD STEESAKVLV
EAIRHQLLPR QIITRKSIEN AIAVIMAVGG STNAVLHFLA IARAAGVELN LDDFETIRGR
VPVLCDLKPS GRYVATDLHK AGGIPQVMKM LLVHGLLHGD CITITGKTIA EVLADIPEEP
SPNQDVIRPW NKPMYAQGHL AILKGNLATE GAVAKITGVK NPVITGPAKV FESEEDCLDA
ILAGKIKAGD VIVVRYEGPK GGPGMREMLA PTSAIIGAGL GDSVGLITDG RFSGGTYGMV
VGHVAPEAAV GGAIALVQEG DSITIDAHTR SLQLNISDEE LAHRRANWQP RPPRYTKGIL
AKYAKLVASS SVGAVTDLDL FNE
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