| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0022 |
|---|
| Symbol | |
|---|
| ID | 3678867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 19248 |
|---|
| End bp | 20486 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637715349 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_320543 |
|---|
| Protein GI | 75906247 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG2246] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.882894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCA ATAAAACTCA GTCATTGTTG CCAGTACCCG CAGGTAATTT ACAAGTTCCT
GAGTTTCCAC CTAGTGATTC GGGTGTGACT GGTCAACCCA TCCAATTTTC TCTCATCATT
CCTACTTATA AAGAGAGCGG GAACATTAGG AATGTTGTGG AGAGATTAAG TCAGATACTG
GATGAGTTTA TACCAGGAGA TTATGAACTG ATTGTAGTAG ATGATGATAG CCCAGATGGC
ACTTGGGAAG TAGCCCTATC TTTGATGGCA GAATATCCAC AGTTACGAGT AATGCGACGG
CAGGAAGAAA GAGGACTATC TACAGCTGTA ATTCGTGGAT GGCAGGTAGC TAGAGGTAGT
ATTTTGGGAG TAATCGATGG AGATTTACAG CATCCCCCCC ATGTATTGCT GGAACTTTTG
CGGAAAATCC ATAAGGGTGC AGATTTAGCT GTAGCCAGTC GTCACGTAGA TGGGGGTGGT
GTAAGTAGCT GGAGTTTTAT CAGACGCTTT TTGTCTCGTG GGGCGCAATT ATTAGGACTA
GTGATTCTAC CTAGTGTATT GGGTAGGGTT TCCGACCCCA TGAGTGGTTA TTTTATGGTG
CGGCGTAACT GTATTACTAA TGCCACCTTC AATCCGGTAG GATACAAAAT TTTATTAGAA
GTGATTGGGC GGGGTCAAGT AGACGAAATT GCCGAAGTGG GTTATGTATT TTGTGAACGC
CAAGAAGGTG AGAGCAAAGT TACTTGGAAG CAGTATGTAG ATTACATCCA CCATTTAATT
CGCTTGCGAC TTTCCACCGG CAGGCTGCAA AGAATTCATC AAAGCTTTCC CTTTGATAAA
TTCATCCGTT TTGGTTTGGT AGGGTTGAGT GGTGTGTTTG TGGATATGGT GATACTGTAC
CTATTAAGTG ACCCATCAAC ACTAGCCTGG CCACTGACCC GCAGTAAAAT TATTGCCTCA
GAAATAGCAA TTTTCAACAA TTTTCTCTGG AATGATGCCT GGACTTTTGC AGATGTATCC
ATGCAGCAAC AGCATTGGCA TCAACGGTTG AAGCGATTTT TAAAATTTAA TATTGTTTGT
CTGGCCGGGG TAGTGCTGAA TGTACTGATA TTGAATATTA TCTTTAATTA TCTCATTCCT
AACCGCTATA TTGCCAACCT GATTGCGATC GCCATAGCCA CTGTTTGGAA CTTTTGGGTA
AACTTGCGAC TCAGTTGGCG CGTGACTCAA GTCAAATAA
|
|---|
| Protein sequence | MSINKTQSLL PVPAGNLQVP EFPPSDSGVT GQPIQFSLII PTYKESGNIR NVVERLSQIL
DEFIPGDYEL IVVDDDSPDG TWEVALSLMA EYPQLRVMRR QEERGLSTAV IRGWQVARGS
ILGVIDGDLQ HPPHVLLELL RKIHKGADLA VASRHVDGGG VSSWSFIRRF LSRGAQLLGL
VILPSVLGRV SDPMSGYFMV RRNCITNATF NPVGYKILLE VIGRGQVDEI AEVGYVFCER
QEGESKVTWK QYVDYIHHLI RLRLSTGRLQ RIHQSFPFDK FIRFGLVGLS GVFVDMVILY
LLSDPSTLAW PLTRSKIIAS EIAIFNNFLW NDAWTFADVS MQQQHWHQRL KRFLKFNIVC
LAGVVLNVLI LNIIFNYLIP NRYIANLIAI AIATVWNFWV NLRLSWRVTQ VK
|
|---|
| |