Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0021 |
Symbol | |
ID | 3678866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 18581 |
End bp | 19231 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715348 |
Product | TenA family transcription regulator |
Protein accession | YP_320542 |
Protein GI | 75906246 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAATT TTGAATTGGA GCGAAGCGAC TTGACTCTCT CAAATCAACT TTGGACAACA AATCAAGATT TAGCCGCAGC TTGTCTAGAG CATCCCTTTG TTCAAGGTAT TGGTAATGGT AGCCTGGAGA AGCAGAAATT TGCTTATTAT GTAGGGCAGG ATGCTTTTTT CTTAGAAGCC TTCGCCCGTG CTTACAGTAT TGCTGCGGCT AAATCACCAG ACTGGATAGG TTTTACTACG TTTCACAATT TAGCTGGTGG TGTATTGGCA GAGATGCGTC TACATGAAAG CTACGCAGTC CAATGGGGAA TTGATTTACA TTCTGTGCAA CCAGGAGTAG CCACCCGTCG CTATACCGAT TTTTTGTTGG CTACTGCTTG GGGTGGAGAT GTAGGTTTAA CTGCTGCGGC CATGTCGCCT TGTATGCGTC TGTATGCTTT TTTGGGAGAA CAGTTAGCTA AAAATGGTGT TCCTAATCAT CAATACGCTG ATTGGATTCG GACTTACAGT AGTGCTGATT TTCTACCATT AGTACAACAG TTAGAAAGTT TAGTAGAAAA CTATGCTACT GCTAATACCT TAACCAATTC AACTTATCGC TACGCCATGC TTTGCGAACA AGAATTTTTT CAAGCGGCCT GGATGATTTA A
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Protein sequence | MLNFELERSD LTLSNQLWTT NQDLAAACLE HPFVQGIGNG SLEKQKFAYY VGQDAFFLEA FARAYSIAAA KSPDWIGFTT FHNLAGGVLA EMRLHESYAV QWGIDLHSVQ PGVATRRYTD FLLATAWGGD VGLTAAAMSP CMRLYAFLGE QLAKNGVPNH QYADWIRTYS SADFLPLVQQ LESLVENYAT ANTLTNSTYR YAMLCEQEFF QAAWMI
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