Gene Ava_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0013 
Symbol 
ID3679675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp11732 
End bp12634 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content47% 
IMG OID637715340 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_320534 
Protein GI75906238 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.798898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.992459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTAA AGACTCAACC GCTAGCAGCG ACGGCGATCG CTAATTTTGA TAAACTGGTG 
TGGAATTGGC GTAATTACAA AATTCAGTAC ACAGTCATGG GTACTGGACA GCCATTAGTC
CTAGTTCACG GTTTTGGTGC TTCCATCGGA CATTGGCGCA AGAACATTCC AGTTTTGGCG
AATGCTGGCT ACCAAGTCTT TGCGATTGAT TTGCTGGGTT TTGGCGGCTC TGACAAAGCG
GTAATCGATT ACAGTGTAGA TGTTTGGGTA GAACTGCTAA AAGACTTTTG GACAGCCCAT
ATTCAACAAC CAGCCGTATT TGTCGGTAAT TCCATTGGCG CACTTTTAAG CCTGATAGTA
TTGGCAAAAC ATCCAGAGAT TACATCTGGT GGTGTTTTAA TCAACTCAGC AGGTGGTTTA
AGCCATCGCC CCCATGAACT AAACCCACCA CTACGGATTG TGATGGCCAC ATTTAATCGA
GTAGTGCGAT CGCCCATTAC AGGCAAATTT GTCTTTAACC GTATCAGACA AAAAGCTCAA
ATTCGCCGCA CACTCTACCA AGTTTACCGC GATCGTACAG CCGTCACCGA TGAGTTAGTC
GATTTACTTT ACACCCCATC CTGCGACCCT GGAGCGCAGC AAGTTTTCGC CTCCATCCTC
ACAGCACCTC CTGGCCCCAC ACCAGAGGAA CTATTACCCC AAATAGAACG TCCTTTACTA
GTGATTTGGG GCGCTGACGA CCCGTGGACA CCAATTACAG GGGCGAAGAT TTACGAGCAA
GCCCAGGAGA GTGGTCAAGA CATAACAATT ATTCCCATTC CTGGTGCTGG TCATTGTCCC
CACGATGAAG TCCCCAATGT AGTCAATGCC CAGATTATTG ATTGGTTGGC GCAAAGGAAA
TAA
 
Protein sequence
MTLKTQPLAA TAIANFDKLV WNWRNYKIQY TVMGTGQPLV LVHGFGASIG HWRKNIPVLA 
NAGYQVFAID LLGFGGSDKA VIDYSVDVWV ELLKDFWTAH IQQPAVFVGN SIGALLSLIV
LAKHPEITSG GVLINSAGGL SHRPHELNPP LRIVMATFNR VVRSPITGKF VFNRIRQKAQ
IRRTLYQVYR DRTAVTDELV DLLYTPSCDP GAQQVFASIL TAPPGPTPEE LLPQIERPLL
VIWGADDPWT PITGAKIYEQ AQESGQDITI IPIPGAGHCP HDEVPNVVNA QIIDWLAQRK