Gene Ava_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0009 
Symbol 
ID3679671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp8217 
End bp8645 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID637715336 
Producthypothetical protein 
Protein accessionYP_320530 
Protein GI75906234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.572879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.938857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGAT CGATTCCATT GACTTCTAAC ACGCTTTTAC AACGTATAAA TCAACATCAG 
CACCTCAAGA ATTTACGAAA CAAATTACTC AAGCTACATA AGGTTTTGCT AGATAAAGAA
CGCATTACCT ATGAACAAGT GAGTGGCAGA ATATCAAGTG GAGAATTTTT GCAACTTGTA
ATTAGCCACG AGCAGTTTGC TTGGTTACAT AGTATTTCCG AGGTGATTGT TCAAATTGAT
GAAATCCTCA CAGCAGATGA ACCCATATCG CCAGATAACG TCAAAAACTT GATTGTCGAT
ATCCGTACTT TACTCTCGCC ATCAGAAGAG GGAAATACAT TTGCTAGAAA ATACTACACT
GCACTGCAAG GTGAACCCAG TGTGGTTCTA GCACACGCAG AAGTTTCACA ACTGCTTGCA
TTTGCTTGA
 
Protein sequence
MGGSIPLTSN TLLQRINQHQ HLKNLRNKLL KLHKVLLDKE RITYEQVSGR ISSGEFLQLV 
ISHEQFAWLH SISEVIVQID EILTADEPIS PDNVKNLIVD IRTLLSPSEE GNTFARKYYT
ALQGEPSVVL AHAEVSQLLA FA