Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0002 |
Symbol | |
ID | 3679664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1919 |
End bp | 3082 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637715329 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_320523 |
Protein GI | 75906227 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.273248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAG TTTGCGCCCA AAGCGACCTC AGTACCAACC TTTCCTTAGT CAATCGTGCT GTACCATCAC GACCGACTCA TCCAGTACTT GCTAACGTGC TATTACAAGC TGATGCTGAA ACTAATCAAG TAAGCTTAAC AGCCTTTGAT CTCAGTTTGG GTATCCGTAC TAGTTTTAAT GCTGATGTAT GGCAAAGTGG AGCGATCGCA CTTCCTGCTA AATTATTGGT AGATATCACC TCACGTCTGC CAGAGGGAGA GATTACCCTA GATGATGAAT CAGCCACCGA CGGTACAGCA ACCGGAGAAG GTTTAATAGT TAGCCTAACC CCAAAAACCG GAAAGTATCA ATTACGAGCA ATGGGAGCGG AAGAGTTTCC CGAATTACCC CTAATTGAAA ACACCACAGC TATTTATCTC ACAGCTACTT CCTTGATTGA AGGATTGCGT GGTTCATTAT TTGCTACCAG TGGCGACGAA ACTAAGCAAG TACTCACAGG AGTACATCTG ACCGTTAAAC AAGATACTTT AGAATTTGCC GCTACTGATG GACATCGCCT AGCCGTAGTC GAAACCACTA ATGAGCGTCC TTTAGAAGAT AACGACCAGC AATTAGAGGT AACAGTACCA GCTAGAGCCT TACGCGAACT AGAAAGGATG TTGGCTCATA ATGCCGCCTC TGAGGAACCC ATAGCTTTAT ATTTAGACCA AGGTCAAGTC ATATTTGCAT GGCAAAACCA ACGTCTAACT AGTCGTACAT TAGAAGGTCA ATACCCAGCT TATCGCCAAC TCATTCCCCG CCAATTTGAG CGACAAGTAA CCATTGAACG CCGACAATTC TTAAGCACAT TAGAAAGAAT TGCTGTACTA GCAGACCAGA AAAATAATAT CGTCAAGCTA ACTATTGATA GTACAGCCCA AGAACTTACC TTATCTTGTG AAGCTCAAGA AATGGGCAGT GGGAGAGAGT CGATGAATGC CGAAATTGCC GGAGAAGATA TAGAAATTGC TTTTAACGTC AAGTACTTAA TGGAAGGATT AAAAGCCTTA CCATCTCCAG AAATTCAAAT GCACATCAAC CAAAATCTCA CACCAGTAAT TTTTACTCCC CTGGGTGGTT TGAAGATGAC TTATTTGGCT ATGCCGGTGC AATTAAGGAA TTAA
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Protein sequence | MKLVCAQSDL STNLSLVNRA VPSRPTHPVL ANVLLQADAE TNQVSLTAFD LSLGIRTSFN ADVWQSGAIA LPAKLLVDIT SRLPEGEITL DDESATDGTA TGEGLIVSLT PKTGKYQLRA MGAEEFPELP LIENTTAIYL TATSLIEGLR GSLFATSGDE TKQVLTGVHL TVKQDTLEFA ATDGHRLAVV ETTNERPLED NDQQLEVTVP ARALRELERM LAHNAASEEP IALYLDQGQV IFAWQNQRLT SRTLEGQYPA YRQLIPRQFE RQVTIERRQF LSTLERIAVL ADQKNNIVKL TIDSTAQELT LSCEAQEMGS GRESMNAEIA GEDIEIAFNV KYLMEGLKAL PSPEIQMHIN QNLTPVIFTP LGGLKMTYLA MPVQLRN
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