Gene Ava_C0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0208 
Symbol 
ID3678128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp246328 
End bp247473 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content33% 
IMG OID637715288 
Producthypothetical protein 
Protein accessionYP_320482 
Protein GI75812865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.415163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0047208 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAAAA AATTTACTAT GAAAAATTGG AATAGGTGGA ATACAGAAGA AGAAAAACTT 
CTTACTAGAT TAGTTACAAA ATGCTCAAAT ATTGATGAAA TACATCAGGA ATATTTTCCA
TATAGAAGTA GACAATCAGT AAAAGGAAAA CTGAGGTTAC TAGGATTAAC ACTTGAACCA
CAATGGACTG TCGAGGAAGA AGAAATATTA CATGAACTTT ACTCTGAGCT ATCACCAAAG
ATGATACAAT ATCAGTTCAT GCCTCATAGA ACTCTTCCCG CAATTCACGC TAAAGCACAA
AGACTTAACC TAAAACAACG CCATAGATGG ACAAAAGATG AAATACGATA CCTCAAAGAT
AACTATTTAA CTGAAACTTA TGAGGTCATA GGAAAAAAAT TAGGTAGAGA CGAAGCAGGG
GTAAGAGCGA AAGCTCAAGC AATGAAATTA AGAAAACTTG AGTCGTACAC AGTTAATCAT
AATTATTTTA GCACTCCAAA TTTAGAAAAT TGCTATTGGG CAGGATTTTT AGCAGCTGAT
GGATGCATAA ATTATTCAAG TCATGGTTAT ATTTTAGAAG TTGGACTACA GGAACAAGAT
TTAGAGCATT TAAGAATATT AAAGGATTTA CTTGAATGCG ATCGTCAAAT AGCCGAAATG
CATAACTCTA ATCAAAAACA TCAATATCCA TTTGGGAAAA CCTACACGAA TGGTAAAGCC
TTTAGATTGA GAATAAATAG TAAACAAATA TGTGATGATT TGATTGGCAG ATTTAATATT
ACACCAAATA AATCTTTGAC TCTTAAACCT CCTGAGCTAG ATAATGAGCA ATTGATAAAA
GCATTCATTA TCGGATTAAT AGATGGGGAT GGTGGCGTAA ACTTATTCAA AGTCAAAGGA
AAAGTTAATA GCATAGAAAT AGACCTCACA GGAACAATAG AAGTACTCAA TTGGGTAAAA
AACTGGTTTG ATATTTGGGT TTCCAATAAT CATTACAAAT GTGCTAAACC CAAACAAAGC
ATGAATTCAA AAGCTTATCG ATATCATGTA GCAGGGAAAC GAGGAATAGA ATTATGGAAA
ATACTATCCC AAGTTAATGT ACCTAAGTTA AAACGTAAAT GGCACAAACC TTTACCCTAT
TTTTGA
 
Protein sequence
MTKKFTMKNW NRWNTEEEKL LTRLVTKCSN IDEIHQEYFP YRSRQSVKGK LRLLGLTLEP 
QWTVEEEEIL HELYSELSPK MIQYQFMPHR TLPAIHAKAQ RLNLKQRHRW TKDEIRYLKD
NYLTETYEVI GKKLGRDEAG VRAKAQAMKL RKLESYTVNH NYFSTPNLEN CYWAGFLAAD
GCINYSSHGY ILEVGLQEQD LEHLRILKDL LECDRQIAEM HNSNQKHQYP FGKTYTNGKA
FRLRINSKQI CDDLIGRFNI TPNKSLTLKP PELDNEQLIK AFIIGLIDGD GGVNLFKVKG
KVNSIEIDLT GTIEVLNWVK NWFDIWVSNN HYKCAKPKQS MNSKAYRYHV AGKRGIELWK
ILSQVNVPKL KRKWHKPLPY F