Gene Ava_C0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0173 
Symbol 
ID3678152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp201721 
End bp202452 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content33% 
IMG OID637715254 
Producthypothetical protein 
Protein accessionYP_320448 
Protein GI75812831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.372645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.496581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTTT ATTATATCCA AAAGTATCCA TTAAGAACAA AACAAATTTT AGGGATTAGT 
TACGAACAAT TACAATCACT ACTAAATTGT GCGAGCAAAC GTCACCAGGA AATTAAAATT
CAGCAAGAAA GCCGAAAAAT AAGAATTAAT GCGGCTGGTG GAGGTCGCAA AGAATTGTTA
TCAATCCAAG AACAAGTTTG TTTATGCTTA TTTTATTTAA GACAGATGCC GACATTTCAA
GTATTAGGAA TGTTGTTTGG GGTTTCAAAA ACGGAAGCCA ATGATACATT TCACGACTGG
ATAGCAATTC TGAGAGATAT TTTACCCTCT AGTTTATTAG AACAAGTCTC AAATAATAAG
AGCGATTTAC TATTTGTTCA AGAAGTATTA ACTAATTTTA GGCTATTGTT CGATAGCCTA
GAACAGCCAA TATATAGACA TTCTGACCAA AAAGAACAAC AAAAATATTT TTCTGGTAAG
AAAAGACAAC ATACTTTGAA AAGCCAAATG ATTGGGATGC CAGAAGGAAA AGATATTGTT
GAGGTAGAAG TAGGTGTTCC TGGGCCAACA GCAGATATAA AATTGTTTCG TCAATCTCAG
CAAAAATTTG ATAAATCTCA ACCTTTTTCA GGTAATAAAG GATTTCAAGG TGGCGAAAAC
ATCACTACAC CTCATAAAAG AAAACTGAAA CGAGAACTGA CTCAACAGCA AAAAGATGAA
AACAAGTTTT AG
 
Protein sequence
MVFYYIQKYP LRTKQILGIS YEQLQSLLNC ASKRHQEIKI QQESRKIRIN AAGGGRKELL 
SIQEQVCLCL FYLRQMPTFQ VLGMLFGVSK TEANDTFHDW IAILRDILPS SLLEQVSNNK
SDLLFVQEVL TNFRLLFDSL EQPIYRHSDQ KEQQKYFSGK KRQHTLKSQM IGMPEGKDIV
EVEVGVPGPT ADIKLFRQSQ QKFDKSQPFS GNKGFQGGEN ITTPHKRKLK RELTQQQKDE
NKF