Gene Ava_C0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0148 
Symbol 
ID3678006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp177462 
End bp178535 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content49% 
IMG OID637715231 
Productflavin oxidoreductase/NADH oxidase 
Protein accessionYP_320425 
Protein GI75812808 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTGT TTACTCCACT AATAATTCGA GATATCACCT TGCCAAGTCG CGTGGCGATG 
TCACCAATGT GTCAATACTC AGCAGAGAAT GGATTTGCTA ACGATTGGCA CTTCGTCCAC
TTAGGGAGTC GGGCTGTGGG AGGAACTGGT CTGATTATGG TTGAAGCGAC AGCCGTAACA
CCCCAAGGAC GGATTACACC TGGCGACCTT GGGCTTTGGG ACGACAAGCA AATCGAGCCA
CTAACTCGCA TTGTGCGCTT CCTTCGCCAA CAGGGATCTG TTACAGGGAT TCAATTAGCC
CATGCTGGAA GGAAGGCAAG TTGCAATGTT CCTTGGTTAG GCGGTACGCC ACTGACACCT
GAACAAGGAG GTTGGCAGCC TGTCGCACCT AGCCCAATTC CTTTTCAAGA GAACGCTCCT
GTACCGATAT CCCTCGATGA GCGTGGTATT CAAGAAACGA TCTTCGCGTT CGTTGCAGCA
GCGCAGCGTG CCCTGCAAGT AGGTTTTCAA ATGATTGAAA TCCACGCAGC ACATGGATAC
TTATTGCATT CTTTTCTTTC ACCACTCAGT AATCGCCGAA CAGATCGTTA CGGCGGTTCG
TTGGAGAACC GAATGCGTTT ATTACTGGAA GTAGTAAGGC GAGTACGAGA TGTTTTGCCC
AACGGGATGC CGCTTTTTGT ACGCATCTCC GCTACCGACT GGGTAGAAGG AGGTTGGGAT
CTCCAGCAAT CAATCATATT GTCCCGTGAA CTAAAGACTC TAGGCGTTGA TTTGATCGAT
GTTTCAACAG GAGGTTTAGT ACCCCATGCC AGAATTCCTG TGGAGAAAGG CTATCAAGTC
CCTTTTGCTG CCAAAATCCG AGAAGAGGCT GGGATCATGA CAGGAGCTGT GGGGCTGATA
AATGAGGCTG AGTATGCCGA CCAAATAATT ACTCGTGGGT GTGCAGATTT GGTTCTCATC
GGTCGAGAAT TACTCCGCAA TCCATACTGG TCGATTTATG CCCGTTGTAG CTTGGATGAA
GAACCTAATT GGCCTGTGCC TTACGGTTAT GCAGTTAAAC GACAGAGAAG GTGA
 
Protein sequence
MDLFTPLIIR DITLPSRVAM SPMCQYSAEN GFANDWHFVH LGSRAVGGTG LIMVEATAVT 
PQGRITPGDL GLWDDKQIEP LTRIVRFLRQ QGSVTGIQLA HAGRKASCNV PWLGGTPLTP
EQGGWQPVAP SPIPFQENAP VPISLDERGI QETIFAFVAA AQRALQVGFQ MIEIHAAHGY
LLHSFLSPLS NRRTDRYGGS LENRMRLLLE VVRRVRDVLP NGMPLFVRIS ATDWVEGGWD
LQQSIILSRE LKTLGVDLID VSTGGLVPHA RIPVEKGYQV PFAAKIREEA GIMTGAVGLI
NEAEYADQII TRGCADLVLI GRELLRNPYW SIYARCSLDE EPNWPVPYGY AVKRQRR