Gene Ava_C0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0128 
Symbol 
ID3678064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp157518 
End bp158360 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID637715211 
Productferredoxin 
Protein accessionYP_320405 
Protein GI75812788 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.512619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA ATCAAGAACG ACAAGACTTC GATCTAACCG AAAGCGATGA GCAACTCAGC 
GCGGACGAAA AAACACTACT CGACGAACTC GGTATTGTCG GTGCTGCTCG CCGAAAATTC
TTGGAGCAAA ACATGGCTGC GGCACTCGGC ACCTTCGCCT TCCACCTGCT GGCTAAAGAG
GAGGTCTTTG CCACGCTCGC CGCTTCGCCC GACGCAGTGT TCGCTTCGAC CGCTGGGGTG
GAAAACGCCG TTAAGGTCTT GTTGAAAATC AACGGCTCTA CTCAACGCCT GGAAGTGGAT
TCGCGCACGG TGCTGCTCGA TGCCCTACGC GAAAGACTTG GATTGACCGG CACCAAAAAA
GGGTGCGATC AAGGACAGTG CGGTGCTTGT ACAGTGATCG TTGACGGACG CCGCGTGCTT
TCGTGTCTGA CACTTGCCGC GAGCTGCGAG GGAAAAGAGG TGACGACTAT CGAAGGGCTG
GCTGACGCCG ACAATCTTCA TCCGATGCAG GCGGCGTTCA TCAAACACGA CGGCTTCCAG
TGCGGCTACT GCACGCCGGG GCAGATATGT TCGGCAGTGG CGCTTTTGCA GGAAGCCAAA
AACGGCGACG TGAGTCACGT CACTAACAAT TTGCGGACGA GTCCCCAGAA TTTAGAACTC
TCTGATGAAG AAATCAGAGA ACGCATGAGC GGCAACATTT GCCGTTGCGG CGCTTATCCA
GGAATCGTTG CGGCAATCAA AGAAGTTCAT TCCGGGCGCG AAACAGCCCA GACCAGGCAT
TTTGCAAGCG ATGAAGAAAT TGCCATTGCA TTCAATGAGG GCAAAGCCGA TGAAATCGTT
TAA
 
Protein sequence
MDDNQERQDF DLTESDEQLS ADEKTLLDEL GIVGAARRKF LEQNMAAALG TFAFHLLAKE 
EVFATLAASP DAVFASTAGV ENAVKVLLKI NGSTQRLEVD SRTVLLDALR ERLGLTGTKK
GCDQGQCGAC TVIVDGRRVL SCLTLAASCE GKEVTTIEGL ADADNLHPMQ AAFIKHDGFQ
CGYCTPGQIC SAVALLQEAK NGDVSHVTNN LRTSPQNLEL SDEEIRERMS GNICRCGAYP
GIVAAIKEVH SGRETAQTRH FASDEEIAIA FNEGKADEIV