Gene Ava_C0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0119 
Symbol 
ID3677827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp147757 
End bp148140 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content41% 
IMG OID637715202 
Productsingle-strand binding protein 
Protein accessionYP_320396 
Protein GI75812779 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATA TCAACAAAGT CATGCTAGTT GGCAGATGTG GACAAGAACC CGATCTAAAA 
TTTTTCGAGT CGGGCGCAGT TAAAGCTTCA ATCTCTATTG CAGTAAGACC ACCCTACAGA
AGTGAACAAG CTCTTTGGTT TGATTTAGTC GCTTGGGGAA ATCAAGCAGA AGTGATTGGA
AATTACGTTC GTAAAGGAAC TCAAATTGCA ATTACTGGTG AGTTTGGATT TGATCGTTGG
GCTGATAAAA ATTCTGGCAC TATGCGGCAA AAGCCTGTAA TCACAATCAA CACCATCGAA
TTACTAGGTT CACCCCGTAA GGAAGAATCT ACATCTACTT CTTTACCAAA CGAAACACAG
GCTGTAGCTA ACGCAAATTT CTAG
 
Protein sequence
MNYINKVMLV GRCGQEPDLK FFESGAVKAS ISIAVRPPYR SEQALWFDLV AWGNQAEVIG 
NYVRKGTQIA ITGEFGFDRW ADKNSGTMRQ KPVITINTIE LLGSPRKEES TSTSLPNETQ
AVANANF