| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0112 |
|---|
| Symbol | |
|---|
| ID | 3678087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007412 |
|---|
| Strand | - |
|---|
| Start bp | 134591 |
|---|
| End bp | 135325 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637715195 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_320389 |
|---|
| Protein GI | 75812772 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACA TTGAGAACAA AGTCATTGCG ATCACTGGAG CCAGTAGCGG GATTGGCGAA
GCCACAGCTA AGTTACTTGC TCGAAACGGT GCAAAGGTGC TTTTGGGTGC ACGACGCACC
GAAAAGCTCG AAAAGATTGT TGAGGAGATC CACGCCTCAG GCGGTACAGC AGAATTTAAA
GCCGTAGATG TCACCGATCG AGAAGATGTG AAAGCGTTCA TTGGGTTTGC AAAAGACAAG
TTCGATCGCG TTGATGTCAT CTTCAACAAT GCAGGCGTGA TGCCTCTATC CCCGATGAAT
GCTTTGAAGG TCGAGGAATG GGACAACATG ATTAACGTGA ATATCAACGG GGTGTTGAAT
GGCATTGCAG CAGCTTTGCC GATTATGGAA GCGCAAGGTA ACGGACAAAT CATCAATACT
GCGTCGATTG GTGCCCATGT GGTAGTACCC ACTAGCGCAG TTTACAGCGC TACCAAGTAC
GCAGTTTGGG CAATCTCCGA AGGACTGCGA CAGGAGTCGA AAATGATTCG CGTCACCGTC
ATCTCTCCCG GTGTGGTTGA GACCGAACTC GGCTCTGATA TCACAGACGA GCCAACAAAA
GGCTTCTTGA AAGAACTTCG CAAAGACGCA CTCAACCCGG ATACGATTGC CAGCGCTGTT
CTGTATGCCG TGTCTCAGCC GGATGATGTC GATGTCAACG AAGTGATTGT TCGCCCGATC
CGCCATATGA TGTAG
|
|---|
| Protein sequence | MLNIENKVIA ITGASSGIGE ATAKLLARNG AKVLLGARRT EKLEKIVEEI HASGGTAEFK
AVDVTDREDV KAFIGFAKDK FDRVDVIFNN AGVMPLSPMN ALKVEEWDNM INVNINGVLN
GIAAALPIME AQGNGQIINT ASIGAHVVVP TSAVYSATKY AVWAISEGLR QESKMIRVTV
ISPGVVETEL GSDITDEPTK GFLKELRKDA LNPDTIASAV LYAVSQPDDV DVNEVIVRPI
RHMM
|
|---|
| |