Gene Ava_C0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0107 
Symbol 
ID3678082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp128094 
End bp128954 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content47% 
IMG OID637715190 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_320384 
Protein GI75812767 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTACA TTACCGTTGG TCAAGAAAAC TCTGCAACCA TCGATCTCTA CTACGAAGAT 
CTTGGGACAG GACAACCGAT TGTTCTGATT CATGGATTTC CATTGAACGG ACATTCCTGG
GAGAAGCAGG TTTTAGTTTT ACTGAATGCA GGATATCGAG TAATTACCTA CGATCGCCGA
GGATTTGGCA ACTCCAGTCA GCCCTCATCT GGCTATGACT ACGATACCTT CGCCGCCGAT
TTGAATACAC TCATGACCAA GCTTGACTTG CAAAATACCG TGCTGGTCGG TTTCTCAATG
GGAACGGGTG AAGTCACACG TTATCTTGGC AAATACGGCT CAGAGCGGGT GCAGAAAGCC
GTGCTGATAG CTCCCGTTCC ACCGTTTCTG TTAAAGACAG ACGACAATCC AGAGGGTGTT
GATCAAAGCG TTTTCGATGG CATTATGAAA GCGATTGTTG ACGATCGTCC AGCTTATTTC
TCTGCCTTTT TCAAAGAGTT TTTCAATGTT GATGTATTGC TTGGCGATTC TCGTTCCGAG
AGGCTTCGCC AACGCATCAG CAATGAAGCA ATTCAAGCCA GTTGGAATGT AGCAGTAGGA
GCTTCTGCTA AAGGGACTTT GGACTGTGTA CCCTCTTGGC TCACCGATTT CCGCGACGAT
TTGCCCCGCA TTGATGTACC AACTCTGATT ATTCATGGAG ATAGCGATCG CATTTTGCCA
CTGGAGTCCA CCGCAGCAAG ACTTCCAAAG CTGATTAAAA ACAGTCAACT TGTTGTCATC
CCTGGCGGGC CGCACGCCAT CAACTGGACT CACGCCGATC AGATCAATCC CTTGTTACTG
GACTTTCTTC AGCAGGAATA A
 
Protein sequence
MPYITVGQEN SATIDLYYED LGTGQPIVLI HGFPLNGHSW EKQVLVLLNA GYRVITYDRR 
GFGNSSQPSS GYDYDTFAAD LNTLMTKLDL QNTVLVGFSM GTGEVTRYLG KYGSERVQKA
VLIAPVPPFL LKTDDNPEGV DQSVFDGIMK AIVDDRPAYF SAFFKEFFNV DVLLGDSRSE
RLRQRISNEA IQASWNVAVG ASAKGTLDCV PSWLTDFRDD LPRIDVPTLI IHGDSDRILP
LESTAARLPK LIKNSQLVVI PGGPHAINWT HADQINPLLL DFLQQE