Gene Ava_C0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0098 
Symbol 
ID3678053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp120164 
End bp120904 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content60% 
IMG OID637715182 
Productabortive infection protein 
Protein accessionYP_320376 
Protein GI75812759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.015853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTG TTTCTTCAAA TCACTTGCGG GAGTCGGGAA AGCCCCCTTC CGCGTCCTCG 
GCTCGGTCTA GCAAGACCTC CCGTCCGGGC TGGCCCGAGA TTATCGTCGG ACTCGTTGTC
TATTTAATTG TAGGGTTCGG AGGCATCTCG CTGTTCAAGC AACTCAGTCT TGACCCCGTG
GTCTACGGCC TGATCTTAAC TGCATGGACT GGTGTCGCCA CGCTGATCGC GTTCGCGGTG
GCTGCGCGGC TGCGGATTCG TTCCCTGAGT GCCTTCGGCG TGCGTCGAAC CTCCGGACGC
TGGCTCCTGA TCGGCGTCGG AGTAGGACTG GTTGCCTTCG TGCTCAAGAG TCTGGCGATC
CTAGCCTGGG TTCAGATCAC TGGGGACACG AACAATGTCC AGGATGTTTA CGGAGATGGC
GCTCGCGGCG GGTTACTGTC TCTGGTTTTG AGCACGGTGT TCATTGCCGT CTTCTCACCC
CTTGGTGAGG AACTGCTCTA CCGAGGCATC GTCACCAACG CGCTGCTGCG CTACGGCCCG
TTTGTTGGGG TCGTGGGCAG CACTGTGATC TTCGCTCTCA TGCATGGGAT TAACAACATC
TTTCCCGCTG CTGTGGTGGC TGGTCTCGCC ACCGCCGAGG TCTTCCGCCG CAGCGGATCG
ATCTGGCCCG GCCTCGTCGT CCACTTCGTT TTCAACCTGC CCTCGTTCCT GTTGATGGTG
TTGTTCACCA GCACGGGCTG A
 
Protein sequence
MPRVSSNHLR ESGKPPSASS ARSSKTSRPG WPEIIVGLVV YLIVGFGGIS LFKQLSLDPV 
VYGLILTAWT GVATLIAFAV AARLRIRSLS AFGVRRTSGR WLLIGVGVGL VAFVLKSLAI
LAWVQITGDT NNVQDVYGDG ARGGLLSLVL STVFIAVFSP LGEELLYRGI VTNALLRYGP
FVGVVGSTVI FALMHGINNI FPAAVVAGLA TAEVFRRSGS IWPGLVVHFV FNLPSFLLMV
LFTSTG