Gene Ava_C0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0083 
Symbol 
ID3677835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp110698 
End bp111657 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content35% 
IMG OID637715167 
ProductDNA polymerase III subunit delta 
Protein accessionYP_320361 
Protein GI75812744 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTAT ACCTATACTA CGGCGAAGAT ACCTATTCGC TCAACCAAAA AATAGACCAT 
TTGGTGAATC AAAATGTTCA TGCTGAATGG AAAGATTTCA ACTACATCAA GCTATCTGGA
AATGAGAAAA ATATTGCTGC CAAGGTTTTT ACTGAGGTTA TGACTTTACC CTTTGGAGAG
GGTAACAAAA TTGTTCATAC AGACAGCGAT CATTTAATTG GAAGTTTATC AAATGAGGAT
AATAACCAAG AACTTGAAAA TCAACTTTCT CGAATACCTG CAAGTAACAT TCTTTTAATT
ACTAGTAACA AAAAGCCAGA TTCCCGTAGA ACAGTAGTAA AAACTATCCT AAAATATGCT
CAACAAGAAG AGTTTCCTCT CGTTCCTTGT TGGGATAAAA AGGGGATAGT TAATTTGATA
GGGAAGTATG CAGCTATCCA CCAAGTTAAA TTTACACCAG ATGTGACTGA TTATCTAGTC
GAAGCAATTG GTAATAACAC TGCACGAGTC GATAGCGAAT TTGCTAAACT TGCTGTCTAT
GCAAGTGAAA AAATTATTTC TCTTGAGGAG ATAAAACAAT TAGTTAGTAA TCACAATACT
GACTACCAAA AGCTTACTAT TGCTATGTTA AGGAATCATT CAAACTTGGC AATAGCGCAG
GTGGATAAAC TACTAGATAG TAATGAACAT CCACTCAAAA TAGTAGCAAC GCTTACGTCA
TTTTTTCGTA CTTGGCTAAT AACTAAAGCT GGTGTAGAAG CTAGATTATC TGACATAAAG
ATTGCAGAAA TAGCCGAAGT GAAAAACCCT AAAAGATTGT ATTACCTCAA AGATGAAATC
AAGTTTGTAG GCGTTCAAAA ACTGAAAAAC AGCCTTACCT TACTTTTACA ACTCGAAACG
GAACTCAAAA GCGGCACTAA CAATTTAATT AGTCGAATTA TCGAAATTTG CATGATATGA
 
Protein sequence
MPVYLYYGED TYSLNQKIDH LVNQNVHAEW KDFNYIKLSG NEKNIAAKVF TEVMTLPFGE 
GNKIVHTDSD HLIGSLSNED NNQELENQLS RIPASNILLI TSNKKPDSRR TVVKTILKYA
QQEEFPLVPC WDKKGIVNLI GKYAAIHQVK FTPDVTDYLV EAIGNNTARV DSEFAKLAVY
ASEKIISLEE IKQLVSNHNT DYQKLTIAML RNHSNLAIAQ VDKLLDSNEH PLKIVATLTS
FFRTWLITKA GVEARLSDIK IAEIAEVKNP KRLYYLKDEI KFVGVQKLKN SLTLLLQLET
ELKSGTNNLI SRIIEICMI