Gene Ava_C0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0080 
Symbol 
ID3677819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp108190 
End bp108573 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content47% 
IMG OID637715164 
Producttransposase 
Protein accessionYP_320358 
Protein GI75812741 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGAA AGTCTTACCC CACAGACTTA ACTGATATGG AGTGGGAAAT TCTGGCTCCA 
TTGATTCCAC CAGCCAAAGA AGGAGGGCAT CCACGCACAA CGGATATGCG TGAGATATGC
AATGCTATCT ACTATCACTT GAAAACGGGA TGCCAATGGA ATATGCTTCC GGGGGACTTT
CCACCCAGTT CAACTGTTTA CAGTTACTAC CGCAAATGGC AGCGCAAAGG AGTCTGGGAA
AAATTAAACC ATACACTGCG CGGACAAGTT CGCACAAAAC TAGGCAAATC AACGCAACCC
ACAGCGATCG CCGCAGACAG TCAGTCGGTC AAAACTGACC AAAAAAAGGG GAAGTGTACG
GTTTTGACGG GTGTAAAAAG GTAA
 
Protein sequence
MGRKSYPTDL TDMEWEILAP LIPPAKEGGH PRTTDMREIC NAIYYHLKTG CQWNMLPGDF 
PPSSTVYSYY RKWQRKGVWE KLNHTLRGQV RTKLGKSTQP TAIAADSQSV KTDQKKGKCT
VLTGVKR