Gene Ava_C0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0076 
Symbol 
ID3677815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp105250 
End bp106539 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content44% 
IMG OID637715160 
ProductATPase 
Protein accessionYP_320354 
Protein GI75812737 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.872704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAC CACTACATCT CAAATACCGT CCCCAGACTC TTAGTGAAGT TATTGGGCAA 
GAACATATCG TTCGCACTCT CATAAATGCG ATCGCTCTCC AAAAGATTGC ACCTGCTTAC
CTATTTAGCG GCCCCAAAGG TACAGGTAAA ACCAGTACCG CCCGCATCAT CGCTAAATCC
CTCAACTGTC AATCAAGCAA TGAGCCGACA ACCAAGCCTT GTGGAGAATG CAATTCATGC
AAGGGAATTA CAGCATCTTC TTCTGTTGAT GTAACCGAAC TGGATGCAGC AAGCAATAGT
GGGGTAGAAC TGATCCGAGA GCTTATATCC ACTATCCAGT TTGCACCAGT GGAAGGTAGA
TTCAAAATAT TCATTATTGA TGAATGTCAT GCTCTAAGCA GCCAATCGTG GCAAGCACTC
CTCAAAACCA TTGAAAGCCC TCCCCGTCAT GTAGTATTTA TCTTCTGCAC AACCGAGTTA
CACAAAGTTC CAGAAACCAT TGTCTCCCGT TGCCAAAAGT TTGACTTTAA GAGAGTTCCT
GTCTCGCTAG TTGCAAGCTA CCTAGAACAA ATATCTCACC AAGAAAGTAT CAACATTGCG
CCATCAGCAG TTACCGCCGT AGCTAAAGCA AACAAGGGAC ATCTGCGCGA CTCACTCAAA
CTACTAGATC AGCTAACCCT ACTAGGTGAA GAGGAAATTA CCTCTAACTG GGTTTGGGAA
CTATCAGGTA CTATTTCCGA ATACGATCTA CTCACTGCCT GTGAAAATAT CATCAAAGGA
GAAATTACGG GCAATTTAGG CATCCTTCAA GATTGGATTG AATCTGGTAA ACAGCCAACT
GCCATTCATA CAAGTCTTGT CAGTTTCCTC AAAGACTTAC TTGTGTGCAA AACTAATCCC
AATGGCAGAC ATCTTACACA GCTAGAAGAG GACACCTGGG AGAAATTAGT AAGTATCTCG
CAGTTGTGGA ATATCGACCA GATCCGAAAT GCGATCGCCA TCTTAATGGC ACGCCAAAAT
CTCATGCGGG ATGAAGACGC GCACCTTTGG TTAGAAGCTA CACTTATCGA GATAGTTCCA
ACCAACAAGG GTAGTCACCA ATCACAACCC TGGAAAGATT GGAAAACTGC TCAAGATGCG
ATTAACTGGG GCAAGGAACA GTTACCCCAC TTAACACAAG CGCAGTTACA AGAACACTGG
CAAAAGCTGA CACCTATTAA TGGTAAAAAG GCACCTGCTT GGGTAGAAGC TGTCCAAAAG
CTGCAACAAA AACAATTACA GCAAGCTTAA
 
Protein sequence
MYQPLHLKYR PQTLSEVIGQ EHIVRTLINA IALQKIAPAY LFSGPKGTGK TSTARIIAKS 
LNCQSSNEPT TKPCGECNSC KGITASSSVD VTELDAASNS GVELIRELIS TIQFAPVEGR
FKIFIIDECH ALSSQSWQAL LKTIESPPRH VVFIFCTTEL HKVPETIVSR CQKFDFKRVP
VSLVASYLEQ ISHQESINIA PSAVTAVAKA NKGHLRDSLK LLDQLTLLGE EEITSNWVWE
LSGTISEYDL LTACENIIKG EITGNLGILQ DWIESGKQPT AIHTSLVSFL KDLLVCKTNP
NGRHLTQLEE DTWEKLVSIS QLWNIDQIRN AIAILMARQN LMRDEDAHLW LEATLIEIVP
TNKGSHQSQP WKDWKTAQDA INWGKEQLPH LTQAQLQEHW QKLTPINGKK APAWVEAVQK
LQQKQLQQA