Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0076 |
Symbol | |
ID | 3677815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | + |
Start bp | 105250 |
End bp | 106539 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715160 |
Product | ATPase |
Protein accession | YP_320354 |
Protein GI | 75812737 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.872704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAAC CACTACATCT CAAATACCGT CCCCAGACTC TTAGTGAAGT TATTGGGCAA GAACATATCG TTCGCACTCT CATAAATGCG ATCGCTCTCC AAAAGATTGC ACCTGCTTAC CTATTTAGCG GCCCCAAAGG TACAGGTAAA ACCAGTACCG CCCGCATCAT CGCTAAATCC CTCAACTGTC AATCAAGCAA TGAGCCGACA ACCAAGCCTT GTGGAGAATG CAATTCATGC AAGGGAATTA CAGCATCTTC TTCTGTTGAT GTAACCGAAC TGGATGCAGC AAGCAATAGT GGGGTAGAAC TGATCCGAGA GCTTATATCC ACTATCCAGT TTGCACCAGT GGAAGGTAGA TTCAAAATAT TCATTATTGA TGAATGTCAT GCTCTAAGCA GCCAATCGTG GCAAGCACTC CTCAAAACCA TTGAAAGCCC TCCCCGTCAT GTAGTATTTA TCTTCTGCAC AACCGAGTTA CACAAAGTTC CAGAAACCAT TGTCTCCCGT TGCCAAAAGT TTGACTTTAA GAGAGTTCCT GTCTCGCTAG TTGCAAGCTA CCTAGAACAA ATATCTCACC AAGAAAGTAT CAACATTGCG CCATCAGCAG TTACCGCCGT AGCTAAAGCA AACAAGGGAC ATCTGCGCGA CTCACTCAAA CTACTAGATC AGCTAACCCT ACTAGGTGAA GAGGAAATTA CCTCTAACTG GGTTTGGGAA CTATCAGGTA CTATTTCCGA ATACGATCTA CTCACTGCCT GTGAAAATAT CATCAAAGGA GAAATTACGG GCAATTTAGG CATCCTTCAA GATTGGATTG AATCTGGTAA ACAGCCAACT GCCATTCATA CAAGTCTTGT CAGTTTCCTC AAAGACTTAC TTGTGTGCAA AACTAATCCC AATGGCAGAC ATCTTACACA GCTAGAAGAG GACACCTGGG AGAAATTAGT AAGTATCTCG CAGTTGTGGA ATATCGACCA GATCCGAAAT GCGATCGCCA TCTTAATGGC ACGCCAAAAT CTCATGCGGG ATGAAGACGC GCACCTTTGG TTAGAAGCTA CACTTATCGA GATAGTTCCA ACCAACAAGG GTAGTCACCA ATCACAACCC TGGAAAGATT GGAAAACTGC TCAAGATGCG ATTAACTGGG GCAAGGAACA GTTACCCCAC TTAACACAAG CGCAGTTACA AGAACACTGG CAAAAGCTGA CACCTATTAA TGGTAAAAAG GCACCTGCTT GGGTAGAAGC TGTCCAAAAG CTGCAACAAA AACAATTACA GCAAGCTTAA
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Protein sequence | MYQPLHLKYR PQTLSEVIGQ EHIVRTLINA IALQKIAPAY LFSGPKGTGK TSTARIIAKS LNCQSSNEPT TKPCGECNSC KGITASSSVD VTELDAASNS GVELIRELIS TIQFAPVEGR FKIFIIDECH ALSSQSWQAL LKTIESPPRH VVFIFCTTEL HKVPETIVSR CQKFDFKRVP VSLVASYLEQ ISHQESINIA PSAVTAVAKA NKGHLRDSLK LLDQLTLLGE EEITSNWVWE LSGTISEYDL LTACENIIKG EITGNLGILQ DWIESGKQPT AIHTSLVSFL KDLLVCKTNP NGRHLTQLEE DTWEKLVSIS QLWNIDQIRN AIAILMARQN LMRDEDAHLW LEATLIEIVP TNKGSHQSQP WKDWKTAQDA INWGKEQLPH LTQAQLQEHW QKLTPINGKK APAWVEAVQK LQQKQLQQA
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