| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0075 |
|---|
| Symbol | |
|---|
| ID | 3677814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007412 |
|---|
| Strand | + |
|---|
| Start bp | 103851 |
|---|
| End bp | 105185 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637715159 |
|---|
| Product | DNA polymerase III beta subunit family protein |
|---|
| Protein accession | YP_320353 |
|---|
| Protein GI | 75812736 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.912734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAA ACATTGAACA ATCTAAACTC GCAGAAATTC TAGAAACTGC TTATCTTGCA
ATTAGTCCTA AGCCTACTGA CCCAATTTTA GGAAATATCT TACTGATAGC AAATGAAGAT
GGGATAGTAT CAGCAACAGG AACAAACCTT AACCTCACAA TTCATACTAC AACGACCGCT
AATGTAGAAA CGTCAGGTCA GGTAGCACTA CCAGCCAAAC TATTAACTGA CACTATTAAC
AATGTCAGAG GAGAAATTTC CTTAGAGGTA GAAAACCAAG CCTGCATAAT TACTCACAAT
AGCGGTAAAT GCCGTCTGAT TGGCGGAAAA CCTGACGAAT TTCCAACTCT TCCCAAGGGA
GAAAATCCAA TAGAAGTAAA TTTAAGTGCC AAGAAACTCC AAACTGCACT TGAAGGGACA
CTGTATTGCA CCAATGGTGA CGAAACAAAG TTAGTTTTAA CTGGTGTCAA CTTCAAAATT
GATACCAATA AGTGGCAAGC TGCTAGTACA AATGGTCACA AATTAGCACT AGTCACAGGA
ACACTTGATA GCGAATATTC TGATCCAATT GACTTTACTG TTCCAGGTAA GTCACTTGGC
GAGTTAAACA AAATTCTCTC TCAAAGTGCC GATACAAGCG TGTGCAATAT TCTTCTATCA
AATAAAACTA TTGAGTTTAG TCTTCCTAAT ACAAAGGTCA TTTCCCGACT TTTAGAGGGA
GAATATCCCA AAATCAATAG CTTGATTCCC AGAACATTTG AGTATGAATT TACATTAGAA
CGCAAGGGAT TTGAGAGCGC ACTGAAGCGA GTAAGTTATC TAGCTGAACG CAAGCAAAAG
GTTGTCAAAA TTCTCTGGGA ATTGGAAGCT ACACAGGCAA CACTATACAC CGAAGCTACT
GATATCGGGG ATGCAGTTGA CTCGGTACTG ATGAAACCAA CAACTAGTCA TTCAGAAAAC
ATCAGTATTG GATTAAATAT CGACTACCTT CTCGAAGGAT TAAAGCACAT CAGTACTGAC
GAAATCGTGG TGCGGTGTAA CAAACCCACG CAACCAGTCA TTATCTGCCC AATGGGAGGA
CTGCTCAATC AGTTGTATCT GGTCATGCCT GTAGAAATTA AGCAGGGGTT TGAAAAGGTA
AATAACCAAA GTACAAAGAC AGAAGCCAGC ACTCAACCTG AGCCTAGCAC TGAAGAAGTA
ACAGATATAG CACAGGCAAC AGATGATAGT GAAAATTCTG AAACAGAAAT ACCATCTTTA
GTAGCAAAAG ATACTACTAA AGGCAAGTCA ACCTCACGCT CGTCACGAAC GAAAAAAGAA
GCCGCGACTG CTTAA
|
|---|
| Protein sequence | MKLNIEQSKL AEILETAYLA ISPKPTDPIL GNILLIANED GIVSATGTNL NLTIHTTTTA
NVETSGQVAL PAKLLTDTIN NVRGEISLEV ENQACIITHN SGKCRLIGGK PDEFPTLPKG
ENPIEVNLSA KKLQTALEGT LYCTNGDETK LVLTGVNFKI DTNKWQAAST NGHKLALVTG
TLDSEYSDPI DFTVPGKSLG ELNKILSQSA DTSVCNILLS NKTIEFSLPN TKVISRLLEG
EYPKINSLIP RTFEYEFTLE RKGFESALKR VSYLAERKQK VVKILWELEA TQATLYTEAT
DIGDAVDSVL MKPTTSHSEN ISIGLNIDYL LEGLKHISTD EIVVRCNKPT QPVIICPMGG
LLNQLYLVMP VEIKQGFEKV NNQSTKTEAS TQPEPSTEEV TDIAQATDDS ENSETEIPSL
VAKDTTKGKS TSRSSRTKKE AATA
|
|---|
| |