Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0028 |
Symbol | |
ID | 3678104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | + |
Start bp | 46157 |
End bp | 46810 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637715112 |
Product | transcriptional regulator |
Protein accession | YP_320306 |
Protein GI | 75812689 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.572077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.204969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG ATCGACCAGT AGAATCAACT AGCATTCGGA CTCGACAGGC GGTTGTCAAA CGGCTCAAGC AAGAAGGATC GATAGATGCG GAAACGCTCG CCTCCTACTT GAACATCACT GCAATGGCAG TGCGGCAGCA TCTCTACGCT TTGCAAAAAG AAGGATTGGT GACGTACCAG AAACAAGCGC GTCCAATGGG ACGACCTGCC AAGTTATGGG AGTTAACGCC TGCTGCCGAT CGTTTTTTCC CCGATCGCTA CGCTGAGTTA ACGTTGGGTC TGATTAACTC AATGAAAGAG GCATTTGGTG AAGAGGGATT TGATCGGCTA CTGGAAGTTA GAACTCGCGA ACAAATTCAA GCGTATCGAG CGATCGTACC TCGCCATACT CCGCTTCAAC AGCAACTAGA AGCGTTAGCA GCGCAGCGAA CTGAGGAAGG CTACATGGCA GAGGTCACAG ATCAAGCCGA TGGCACCTTT CTCTTCGCTG AAAAACATTG CCCCATTTGT GCGGTGGCAA CTGCTTGTAC TGGGCTGTGT CAGATGGAGT TAGAAATCTT TCAAGCGGCT TTAGGTGACG ATGTGAGCAT TGAACGAATT GAACACATTT TGGCGGGCGA TAGATGTTGT GTATATCTGG TTATCAGTAC TTAA
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Protein sequence | MKTDRPVEST SIRTRQAVVK RLKQEGSIDA ETLASYLNIT AMAVRQHLYA LQKEGLVTYQ KQARPMGRPA KLWELTPAAD RFFPDRYAEL TLGLINSMKE AFGEEGFDRL LEVRTREQIQ AYRAIVPRHT PLQQQLEALA AQRTEEGYMA EVTDQADGTF LFAEKHCPIC AVATACTGLC QMELEIFQAA LGDDVSIERI EHILAGDRCC VYLVIST
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