Gene Ava_C0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0006 
Symbol 
ID3677798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp14595 
End bp15410 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content41% 
IMG OID637715090 
Producthypothetical protein 
Protein accessionYP_320284 
Protein GI75812667 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.868865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0557095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC AAAATATAGC TGGTTTTAGT AAAGTTGATG ATACTGCAAA TCCGCAAGAT 
TTTGTATCTT ATTTAGATGC TATCAGTAGC TTAAATTCTA TTCAGAAGTA CAAACAACAA
ACATTTACGC GCTTAGAAAT ACAAGCAGGC GATCGCATTC TTGATGTAGG CTGTGGAATA
GGTGATGATG TGCGATCGCT TGCTGTCAAA GTGGGAAATG CTGGCGAAGT AGTTGGAATT
GATCGCAGTG AGACAATGGT GAAAGAAGCC CAAAGCCGAT CCGCAGATTT GGGTTTACCT
GTTGCATATT ATGTAGGCGA TGCAGAAAAG CTGGAGTTTC CCGATTGTAC ATTTGATGCT
TGTCGTAGCG ATCGCACTTT TCAACATTTG TTAAATCCCC GCCAAGCTTT AACGGAAATA
GTGCGCGTCA CCCGTTGCGG TGGACGAGTT GTTGTTTCTG ATCCTGATTG GGAAACTTTG
GTCATTGATA CAGGCGATCG CGCTTTAACT CGCAAGATAT TAAACTTTCA TTGTGATAGT
TGCGTTAACG GCTGGATAGG ACGACAATTA CCTACGCTTT TTCAAGAAGT TGGGTTACAT
AAAATCAATG TTGATACATA TACTTTAATT TTGACTGACT GTACCTTAGC AGATAAACAT
TTGGGAGTAA TTAATGCGGC GATGAAAGCC CAGCAAGCAG GTTTAATCTC AATCGCAGAA
GCCGCTAATT GGATTACTAA TTTGGAAGCA GCAAGTCAAG CTGGTCGTTT TTTTTGCGCT
ATTACAGGTT TTTTGGCTTT TGGATGTAAG CCTTAA
 
Protein sequence
MKKQNIAGFS KVDDTANPQD FVSYLDAISS LNSIQKYKQQ TFTRLEIQAG DRILDVGCGI 
GDDVRSLAVK VGNAGEVVGI DRSETMVKEA QSRSADLGLP VAYYVGDAEK LEFPDCTFDA
CRSDRTFQHL LNPRQALTEI VRVTRCGGRV VVSDPDWETL VIDTGDRALT RKILNFHCDS
CVNGWIGRQL PTLFQEVGLH KINVDTYTLI LTDCTLADKH LGVINAAMKA QQAGLISIAE
AANWITNLEA ASQAGRFFCA ITGFLAFGCK P