Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0006 |
Symbol | |
ID | 3677798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 14595 |
End bp | 15410 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637715090 |
Product | hypothetical protein |
Protein accession | YP_320284 |
Protein GI | 75812667 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.868865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0557095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGC AAAATATAGC TGGTTTTAGT AAAGTTGATG ATACTGCAAA TCCGCAAGAT TTTGTATCTT ATTTAGATGC TATCAGTAGC TTAAATTCTA TTCAGAAGTA CAAACAACAA ACATTTACGC GCTTAGAAAT ACAAGCAGGC GATCGCATTC TTGATGTAGG CTGTGGAATA GGTGATGATG TGCGATCGCT TGCTGTCAAA GTGGGAAATG CTGGCGAAGT AGTTGGAATT GATCGCAGTG AGACAATGGT GAAAGAAGCC CAAAGCCGAT CCGCAGATTT GGGTTTACCT GTTGCATATT ATGTAGGCGA TGCAGAAAAG CTGGAGTTTC CCGATTGTAC ATTTGATGCT TGTCGTAGCG ATCGCACTTT TCAACATTTG TTAAATCCCC GCCAAGCTTT AACGGAAATA GTGCGCGTCA CCCGTTGCGG TGGACGAGTT GTTGTTTCTG ATCCTGATTG GGAAACTTTG GTCATTGATA CAGGCGATCG CGCTTTAACT CGCAAGATAT TAAACTTTCA TTGTGATAGT TGCGTTAACG GCTGGATAGG ACGACAATTA CCTACGCTTT TTCAAGAAGT TGGGTTACAT AAAATCAATG TTGATACATA TACTTTAATT TTGACTGACT GTACCTTAGC AGATAAACAT TTGGGAGTAA TTAATGCGGC GATGAAAGCC CAGCAAGCAG GTTTAATCTC AATCGCAGAA GCCGCTAATT GGATTACTAA TTTGGAAGCA GCAAGTCAAG CTGGTCGTTT TTTTTGCGCT ATTACAGGTT TTTTGGCTTT TGGATGTAAG CCTTAA
|
Protein sequence | MKKQNIAGFS KVDDTANPQD FVSYLDAISS LNSIQKYKQQ TFTRLEIQAG DRILDVGCGI GDDVRSLAVK VGNAGEVVGI DRSETMVKEA QSRSADLGLP VAYYVGDAEK LEFPDCTFDA CRSDRTFQHL LNPRQALTEI VRVTRCGGRV VVSDPDWETL VIDTGDRALT RKILNFHCDS CVNGWIGRQL PTLFQEVGLH KINVDTYTLI LTDCTLADKH LGVINAAMKA QQAGLISIAE AANWITNLEA ASQAGRFFCA ITGFLAFGCK P
|
| |