Gene Ava_A0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_A0003 
Symbol 
ID3677974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007411 
Strand
Start bp2982 
End bp3545 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content40% 
IMG OID637715056 
ProductFHA domain-containing protein 
Protein accessionYP_320250 
Protein GI75812632 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTT GTACAGCTTG TGGCTATGAT AAAAACCCAG ATGATGCTGA ATATTGTGAT 
GCTTGCGGCT CTGAACTACA AACAGTAGCC GCACCCACAT CTACATCTTC TGTTGCACCT
ACTGTTCTTC AATCACCAAT AATTGAGCAA GAAATTCCAG CACCACAAAT ACCACAACCA
ACTTATCCAA CTTCTACCCC TACTTCTCCT ACCTTCTCAA CTACTGCAAC AACAGCCAAA
CTTATTTCCA AGCAACCAGG TTCTCCCATA GCAGAATTTT CCTTAGATAG TAATGCTGTG
GTTGGAATAT TTGATCCAGA CATGGGGCCA GTTGATATTG ACTTAGAAGA ATTTCCTGGT
GGTAACACAG TTTCACGCAA CCATGCAGAA ATTTATATAG AAGGTGGAGT TTGGAAAATT
AAAGACCTTG GTTCGACGAA TGGAGTTTTC ATTAAACAAA GTAGTCAAAC TCGTTTTGGA
GCTAGAATTA CTGTACCTGA AACCATAAAT TTTGGAGACG AAATTGCATT TGGTAAAGTG
CGATTCCTGT TTCAAAGTAC TTGA
 
Protein sequence
MITCTACGYD KNPDDAEYCD ACGSELQTVA APTSTSSVAP TVLQSPIIEQ EIPAPQIPQP 
TYPTSTPTSP TFSTTATTAK LISKQPGSPI AEFSLDSNAV VGIFDPDMGP VDIDLEEFPG
GNTVSRNHAE IYIEGGVWKI KDLGSTNGVF IKQSSQTRFG ARITVPETIN FGDEIAFGKV
RFLFQST