| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0235 |
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| Symbol | |
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| ID | 3677703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | - |
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| Start bp | 262414 |
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| End bp | 263916 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637714941 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_320135 |
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| Protein GI | 75812516 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGAAC TCAAAAATTT TAGTCCTAAT TTTCTTCCTA GTGCAAAATC CGATGAATAC
CTACCTCAAA TTGGTATTTG GACGCGACTA GGAGGATTTT TTCTTGTGGG TGTGGTGGGT
ATGGCTGTGA GTGTCGCAGC TTTGACAAGA TATCATCAAA CAGTGAAAGC ACCTGGAACT
GTGCGTCCGA CTGGAGAATT ACGTATAGTT CAAACAGCAA TAGCAGGAAC GGTGAAAAAA
ACTTTTGTCA GAGAAAATCA GTTGGTTAAC CAAGGTGAAT CTTTAGTAAT TCTTGATGAT
ACTCAACTAC AAACTAAAAA AAGTCAACTA CAAGGAAATA TTCAAAAATC TCAGCAACAA
CTTCACCAAA TAAATGCTCA AATTCTCGCT TTAGATCAGC AAATTACCAC AGAAAATCAG
CGTGGTGAAC GTGTGATTTC CTCAGCTAAG GCTGAACTCA ACTTGACACA AAGAGAGTAT
GCAGATAAAC AAATTGCGGT GAGTAGTGAA TGGCAAGAAG CTGAGGCTAA TCTGAAAATT
GCTCAAAATG AATTGCAGCG ATCGCAAGCT GATTTAAAAT CCATTCAAGC TAATCTCAAA
AGTGCAGAGG CTGCATATCA AGCGGCAATT GTCAAGCACG ATCGCTATCA AATTATCGCC
CAATCTGGCT CTATTTCCCA AAACCAACTA GAAGAAGTAC AACTAGCAGC AACACAACAA
GCACAAGTTT TAGAATCCCA AAAAGCCGCC GTAGAAAGTC AAAAACAAGT CATTCAGCAA
AAACAGCAAG CTTTAACAGC CGCAGTAGCC AACCGGGTGA AAGCCTCCTC AGCATTAAAC
CCCAGTGATG CAGTGATGAC AATTGCTCAA GAAAAAATTG CCACTGAACA GGCTAGTAAA
CAAAATAATT TAGCTCGTTT ACGCCAAGAA AAAGAGAGTT TATTACAGCG TCAAACGGAA
ATTCAAGACA CAATTAATAA TACAAAAAAA GAACTGAAAC AGATTTTAGC TGATATTCAA
AAAACTATCA TTCGGGCTTC AGCTACAGGC AATATTTTTA AGTTAGAATT GCGAAACCCC
GGACAAGTTG TAGAATTGGG ACAGGCGATC GCTCAGATCG CCCCCAACAA TAAGCCTTTA
ATCATTAAAG CCCGTGTAGC ATCTGCTGAC ATTGGTAAAG TACAGATTTG TCGATTAGAA
AAAATTGCAG ATTGTCAACA AGGTAAAGTA AATATCCAAT TTTCTGCTTA TCCCTATCCT
GATTACGGCA CACTTAAAGG TGCAGTGAGA GAAATTACTG CCGATGCAAT TACTACAGCA
AATAACTCAT CAATACCTGC CTATTATGAT GCGACAATTG AACCAGAAGT AAATTACTTA
CAAAAAAATT CGCAAAAGTA TCATGTTCAA GCAGGTATGG AAGTCACAAC AGACATCCTA
GCTCAAGAAG AAACTCTGTT AACATTCATA CTCAGGAAAA CTAGATTACT GACTAATTTA
TAG
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| Protein sequence | MVELKNFSPN FLPSAKSDEY LPQIGIWTRL GGFFLVGVVG MAVSVAALTR YHQTVKAPGT
VRPTGELRIV QTAIAGTVKK TFVRENQLVN QGESLVILDD TQLQTKKSQL QGNIQKSQQQ
LHQINAQILA LDQQITTENQ RGERVISSAK AELNLTQREY ADKQIAVSSE WQEAEANLKI
AQNELQRSQA DLKSIQANLK SAEAAYQAAI VKHDRYQIIA QSGSISQNQL EEVQLAATQQ
AQVLESQKAA VESQKQVIQQ KQQALTAAVA NRVKASSALN PSDAVMTIAQ EKIATEQASK
QNNLARLRQE KESLLQRQTE IQDTINNTKK ELKQILADIQ KTIIRASATG NIFKLELRNP
GQVVELGQAI AQIAPNNKPL IIKARVASAD IGKVQICRLE KIADCQQGKV NIQFSAYPYP
DYGTLKGAVR EITADAITTA NNSSIPAYYD ATIEPEVNYL QKNSQKYHVQ AGMEVTTDIL
AQEETLLTFI LRKTRLLTNL
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