Gene Ava_B0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0172 
Symbol 
ID3677900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp192392 
End bp193822 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content40% 
IMG OID637714879 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_320073 
Protein GI75812454 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTTT TGTCAGACCC CATTATATTG TCGCGTATAC AATTTGCCGT GACTAGCGTA 
TTTCATATGT TATGGCCTGT CTTAACCATC GGTATGGCGG GTTATTTGGT AGTAGTAGAA
ATTCTCTGGT TGCTCACAAA AAACCCTGAT TACTACCGTC ATGCACGTTT CTGGTCAAAA
ATCTACATTC TTAATTTTGG GTGTGGAGTC GCATCTGGAG TTGCTTTAGA ATTTGAATTT
GGTGCTAATT GGTCTCCATT TTCTGTAGCT GTTGGTGACT TTTTCGGCAC AATTTTAGGC
TTTGAAGGCA CAATGGCATT CATGCTAGAA GCAGCCTTTT TAGGCATCAT GATTTCTGGT
TGGAATCGTG TACCTAGTTG GTTACATTTG CTATCAACAA TCATGGTTTT TGTTGGTGCA
AGTCTATCTT CTTTTTGGAT TATTGTCGCT AATTCTTGGA TGCAAACACC TGCTGGTGGC
GAAATGGTGA ATGGTAAATT CATCGTCCAT GACTTTATCC AAGCCATTTT TAATCCAGCA
GCATTAAGTA GTTGGTTTCA CATGGTTTTG GCGATTTTAG AAACTGCACT ATTTGTAATT
GGCGGAATTA GTGCATGGTA TATTCTCAAG AATCGCCATC ATGCTTTCTT CAGTAAATCT
TTCAAACTGG CTCTAGCTCT AGCTATTTTT GTCACTCCTC TACAACTATT TGTTGGTCAT
ATCAGTGGTG AACAAGTTTA TCACAACCAA CCCACAAAAT TAGCTGCAAT AGAAGCAATT
TGGGATACTA TTCCCGCCGG AGAATCTGCA CCTTGGACAG CATTAGTTGC ACCTGATATA
GCTGGAGAGA AAAATCATTG GGAACTGAAT ATTCCTCATG CTTTGAGTTA CATCTTAGAA
ATGAAACCCA CTCTTTCTGA ACCAGTACAA GGCTTGAAAG AGTGGAAACC ACAAGATAGA
CCCCATGCTA TCAGTCTTAT TTTCTATTCT TTCCGCATCA TGGTGGGAAT TGGCTTCTTT
TTATGTGGGT TAATGTTGTT CAGTGTTGTT CAATGGTGGC GCGGTAAACT TGCCATAGAA
AATATCACTC AACAACGTTG GTTGATGCGA GGTTGGATAT TTGCTGCGCC TTTAGGATAT
ATGGCTGTGG AGTTTGGTTG GATAGTGCGA GAAGTGGGAA GACAACCTTG GACTGTATAC
GGAAAAATTC GTACAGCAGA TGCAGTTTCT CATCTCCCAG CAAATACGGT TCTCACTTCA
TTGATAGCTT ATATAGTTAT CTATTTGCTG TTATTTAGTT CTGCTTTGTA CTTTGGTAGT
CGCATTGTTC GCCAAGGGCC AAATTTGGAA TTACCACTAC CAATAGGTAG TAATGAAAGA
GAATTTGTGA GTGAAGTTGT AGGAGTAAAT ATTCAGGAAG GAGAGGTTTA A
 
Protein sequence
MGFLSDPIIL SRIQFAVTSV FHMLWPVLTI GMAGYLVVVE ILWLLTKNPD YYRHARFWSK 
IYILNFGCGV ASGVALEFEF GANWSPFSVA VGDFFGTILG FEGTMAFMLE AAFLGIMISG
WNRVPSWLHL LSTIMVFVGA SLSSFWIIVA NSWMQTPAGG EMVNGKFIVH DFIQAIFNPA
ALSSWFHMVL AILETALFVI GGISAWYILK NRHHAFFSKS FKLALALAIF VTPLQLFVGH
ISGEQVYHNQ PTKLAAIEAI WDTIPAGESA PWTALVAPDI AGEKNHWELN IPHALSYILE
MKPTLSEPVQ GLKEWKPQDR PHAISLIFYS FRIMVGIGFF LCGLMLFSVV QWWRGKLAIE
NITQQRWLMR GWIFAAPLGY MAVEFGWIVR EVGRQPWTVY GKIRTADAVS HLPANTVLTS
LIAYIVIYLL LFSSALYFGS RIVRQGPNLE LPLPIGSNER EFVSEVVGVN IQEGEV