Gene Ava_B0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0162 
Symbol 
ID3677843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp180892 
End bp181971 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content41% 
IMG OID637714869 
Producttransport system permease protein 
Protein accessionYP_320063 
Protein GI75812444 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTTA AATATCTGCC GTCTAACCTA TTAATACTCT TTAAATCTAC CTCTATCAAA 
ACTTTAGCAT TCTTACTTTT AAGTATTGGG TTGGTTGTTG CATTTTTACT GGATTTAGCT
TTAGGTTCTG TCTCTATCCC TATTCAGGAA GTGATCAATA TTTTACTGGG ACAAGAACCA
GAAAAAGCGA CTTGGGCAAA TATTATTCTG AAATTTAGAC TTCCGAAAGC TGTGACTGCA
ACTTTAGCTG GCGCAGCTTT GGGTGTGAGT GGTTTGCAAA TGCAAACTTT GTTTAAAAAT
CCCTTAGCGG GGCCTTTTGT GTTAGGAATT AGTTCTGGTG CAAGTTTGGG TGTGGCTTTG
GTGGTGTTAA CTGCAAGTGT GGCTACACCA AATTTATTAA ATGATTTAGG AATCATTACT
GATTTTGGGT TGGTGATAGC TGCTAGTCTT GGTGCGGCTG CGGTTTTGGG TTTGATGTTA
GTGGTGGCGC GTCGAGTACA AGAGACGATG ACGCTGTTAA TTTTGGGTTT ATTGTTTGGT
TACGCTACGA GTGCAATTGT GAGTATTTTA TTGCAATTTA GCTCTAGAGA ACGGATTCAA
AGTTATATTA TGTGGACTTT TGGTAGCTTC GCTGGGGTGA CTTGGAAACA GTTAATTGTG
TTAATTCCGG TGATAGTTTG CAGTTTATTG GTGGCGGTGT TGCAATCGAA ATCTTTAAAT
GCGCTGTTGT TGGGGGAAGC TTACGCGCGG AGTTTGGGTT TGACGGTGGA GAAAGCTAGG
TTTTCTATTA TTGGTAGTGC TTCTATTTTA GCAGGTGGCA TTACGGCTTT TTGCGGGCCG
ATCGCATTTT TGGGTGTGGC TATTCCTCAT CTGTGTCGCA GTCTATTTAT GAGTTCTGAT
CATCGGATTT TAATCCCTGG TGTGATGATT ATGGGGGGAA TCTTGGCTTT GGTGGCTGAT
TTATTTTCTC AACTTGCGGT GAGTCAGATG GTTTTACCTT TAAATGCAAT TACGGCTTTG
ATTGGAACTC CTGTGGTTAC TTGGGTGATT TTAAGGCGTA GTTCTGGTAA GTCTTTTTAA
 
Protein sequence
MLFKYLPSNL LILFKSTSIK TLAFLLLSIG LVVAFLLDLA LGSVSIPIQE VINILLGQEP 
EKATWANIIL KFRLPKAVTA TLAGAALGVS GLQMQTLFKN PLAGPFVLGI SSGASLGVAL
VVLTASVATP NLLNDLGIIT DFGLVIAASL GAAAVLGLML VVARRVQETM TLLILGLLFG
YATSAIVSIL LQFSSRERIQ SYIMWTFGSF AGVTWKQLIV LIPVIVCSLL VAVLQSKSLN
ALLLGEAYAR SLGLTVEKAR FSIIGSASIL AGGITAFCGP IAFLGVAIPH LCRSLFMSSD
HRILIPGVMI MGGILALVAD LFSQLAVSQM VLPLNAITAL IGTPVVTWVI LRRSSGKSF