Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0162 |
Symbol | |
ID | 3677843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | + |
Start bp | 180892 |
End bp | 181971 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637714869 |
Product | transport system permease protein |
Protein accession | YP_320063 |
Protein GI | 75812444 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTTA AATATCTGCC GTCTAACCTA TTAATACTCT TTAAATCTAC CTCTATCAAA ACTTTAGCAT TCTTACTTTT AAGTATTGGG TTGGTTGTTG CATTTTTACT GGATTTAGCT TTAGGTTCTG TCTCTATCCC TATTCAGGAA GTGATCAATA TTTTACTGGG ACAAGAACCA GAAAAAGCGA CTTGGGCAAA TATTATTCTG AAATTTAGAC TTCCGAAAGC TGTGACTGCA ACTTTAGCTG GCGCAGCTTT GGGTGTGAGT GGTTTGCAAA TGCAAACTTT GTTTAAAAAT CCCTTAGCGG GGCCTTTTGT GTTAGGAATT AGTTCTGGTG CAAGTTTGGG TGTGGCTTTG GTGGTGTTAA CTGCAAGTGT GGCTACACCA AATTTATTAA ATGATTTAGG AATCATTACT GATTTTGGGT TGGTGATAGC TGCTAGTCTT GGTGCGGCTG CGGTTTTGGG TTTGATGTTA GTGGTGGCGC GTCGAGTACA AGAGACGATG ACGCTGTTAA TTTTGGGTTT ATTGTTTGGT TACGCTACGA GTGCAATTGT GAGTATTTTA TTGCAATTTA GCTCTAGAGA ACGGATTCAA AGTTATATTA TGTGGACTTT TGGTAGCTTC GCTGGGGTGA CTTGGAAACA GTTAATTGTG TTAATTCCGG TGATAGTTTG CAGTTTATTG GTGGCGGTGT TGCAATCGAA ATCTTTAAAT GCGCTGTTGT TGGGGGAAGC TTACGCGCGG AGTTTGGGTT TGACGGTGGA GAAAGCTAGG TTTTCTATTA TTGGTAGTGC TTCTATTTTA GCAGGTGGCA TTACGGCTTT TTGCGGGCCG ATCGCATTTT TGGGTGTGGC TATTCCTCAT CTGTGTCGCA GTCTATTTAT GAGTTCTGAT CATCGGATTT TAATCCCTGG TGTGATGATT ATGGGGGGAA TCTTGGCTTT GGTGGCTGAT TTATTTTCTC AACTTGCGGT GAGTCAGATG GTTTTACCTT TAAATGCAAT TACGGCTTTG ATTGGAACTC CTGTGGTTAC TTGGGTGATT TTAAGGCGTA GTTCTGGTAA GTCTTTTTAA
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Protein sequence | MLFKYLPSNL LILFKSTSIK TLAFLLLSIG LVVAFLLDLA LGSVSIPIQE VINILLGQEP EKATWANIIL KFRLPKAVTA TLAGAALGVS GLQMQTLFKN PLAGPFVLGI SSGASLGVAL VVLTASVATP NLLNDLGIIT DFGLVIAASL GAAAVLGLML VVARRVQETM TLLILGLLFG YATSAIVSIL LQFSSRERIQ SYIMWTFGSF AGVTWKQLIV LIPVIVCSLL VAVLQSKSLN ALLLGEAYAR SLGLTVEKAR FSIIGSASIL AGGITAFCGP IAFLGVAIPH LCRSLFMSSD HRILIPGVMI MGGILALVAD LFSQLAVSQM VLPLNAITAL IGTPVVTWVI LRRSSGKSF
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